BUSCADOR RECOLECTA

Peer reviewed

Software, data, code and notebooks for the reproducibility of the results., Peer reviewed

A total of 171 triplets (sire/dam/offspring) were collected from seven Spanish beef cattle populations (Asturiana de los Valles, n=25; Avileña-Negra Ibérica; Bruna dels Pirineus, n=25; Morucha, n=25; Pirenaica, n=24; Retinta, n=24; Rubia Gallega, n=24). The parents were chosen by minimizing the genealogical coancestry among them with the aim of capturing the existing variability within the populations. Individuals were genotyped using the BovineHD 777K BeadChip (Illumina Inc., USA), The SNPs present in the data file belonged to the autosomal chromosomes and those that were in repeated positions were excluded. Additional requirements were Mendelian error rates below 0.05 and call rates over 95% for both, individuals and SNPs. The quality control was made using the PLINK 1.0.7 software. Phasing was performed with BEAGLE with the "trio" option., Peer reviewed

[Description of methods used for collection/generation of data] We experimentally evaluated how the survival rate, body mass, body composition (i.e. protein, lipid, glucose, glycogen), and immunocompetence (i.e. number of hemocytes) of Culex pipiens females were affected by sugar concentration in their diet. To do so, we reared field-captured larvae in the laboratory and the emerged mosquito females were randomly assigned to different concentrations of sucrose offered ad-libitum (mass/volume%: 0,5%, 1%, 2%, 4%, 8%, 16%). Mosquitoes were analyzed at three different ages, 7-, 14-, and 21- days post-emergence (dpe)., There are three Excell sheets, one for survival, one for nutrition and one for hemocytes. They are named according to this characteristics (survival, nutrition and hemocytes), Peer reviewed

[ES] Recopilación bibliográfica de Carmen Gavira (1948-2000), especialista en Urbanismo y Ordenación del Territorio., [EN] Bibliographic compilation by Carmen Gavira (1948-2000), specialist in Urban Planning and Territorial Planning., No

Bioindication, evaluating biological responses to environmental disturbances, is crucial for assessing ecological status. While historical bioindication relied on macroscopic organisms, the introduction of environmental DNA (eDNA) techniques allows the application of protist without the necessity of morphological identification. In this study we propose a novel bioindication methodology utilizing Arcellinida, a group of top predators among protists, as bioindicators of freshwater ecosystems. In that purpose, we firstly characterized the Arcellinida diversity over one year at three different points of the Lake Sanabria, an ancient glacier lake known to be subjected to anthropogenic disturbances. We compared this diversity with an undisturbed control site. Secondly, we characterized the Arcellinida diversity in other ecosystems to generate the ecological background to test the connectivity between them. Results indicate limited connectivity between the different ecosystems, and an edge effect between terrestrial and aquatic ecosystems. Disturbed freshwater ecosystems exhibited reduced Arcellinida diversity at both specific and infraspecific levels, providing valuable insights into recent disturbances. Arcellinida-based bioindication provides a sensitive, accurate and easy to interpret protocol for monitoring disturbances in freshwater ecosystems. It represents a valuable tool for environmental assessments and conservation strategies., Peer reviewed

Document S1. Figures S1–S5. Table S1. List of primers used in this study, related to Table 1. Document S2. Article plus supplemental information., Peer reviewed

"Financed by EU project GEN4OLIVE — H2020-SFS-2018-2020 / H2020-SFS-2020-1H2020 (Working Package 2), Grant Agreement number: 101000427. Álvaro López-García was financed by MCIN/AEI/10.13039/501100011033 and FSE+ through the grant ref. RYC2022-038499-I (Programa Ramón y Cajal).", Studies on plant microbiomes have highlighted their crucial role in the functioning of natural and agricultural ecosystems. The holobiont concept has reshaped our understanding of plants, considering not only their inherent traits and environment but also their interactions with associated microorganisms. This dataset comprises information on the presence and abundance of different fungal taxa, in the form of Operational Taxonomic Units, in leaves of Olea europaea var. sylvestris, the wild relative of cultivated olive tree in South Spain. The data was generated by meta-barcoding the ITS2 rDNA of fungi via NovaSeq sequencing. This dataset also contains information on the health status of collected leaves., Financed by EU project GEN4OLIVE — H2020-SFS-2018-2020 / H2020-SFS-2020-1H2020 (Working Package 2), Grant Agreement number: 101000427. Álvaro López-García was financed by MCIN/AEI/10.13039/501100011033 and FSE+ through the grant ref. RYC2022-038499-I (Programa Ramón y Cajal)., Peer reviewed

Financed by EU project GEN4OLIVE — H2020-SFS-2018-2020 / H2020-SFS-2020-1H2020 (Working Package 2), Grant Agreement number: 101000427. Álvaro López-García was financed by MCIN/AEI/10.13039/501100011033 and FSE+ through the grant ref. RYC2022-038499-I (Programa Ramón y Cajal)., Studies on plant microbiomes have highlighted their crucial role in the functioning of natural and agricultural ecosystems. The holobiont concept has reshaped our understanding of plants, considering not only their inherent traits and environment but also their interactions with associated microorganisms. This dataset comprises information on the presence and abundance of different fungal taxa, in the form of Operational Taxonomic Units, associated to the rhizosphere of Olea europaea var. sylvestris, the wild relative of cultivated olive tree in South Spain. The data was generated by meta-barcoding the ITS2 rDNA of fungi via NovaSeq sequencing., Financed by EU project GEN4OLIVE — H2020-SFS-2018-2020 / H2020-SFS-2020-1H2020 (Working Package 2), Grant Agreement number: 101000427, Peer reviewed

Database on individual bird escape distances and modes, as well as body mass, diet, hábitat, latitude and climate data for each bird species and locality, Peer reviewed