BUSCADOR RECOLECTA

Data underlying Figs 1B, 2C, 3C, 3D, 3E, 4A, 4B, S3, S4, S5,, Peer reviewed

List of collected genome assemblies from the public domain., Peer reviewed

[Description of methods used for collection/generation of data] Data acquired with a high-kinetic-energy Scienta EW 4000 hemispherical analyser installed on the HAXPES endstation of the GALAXIES beamline of the French national synchrotron facility SOLEIL (France) [Methods for processing the data] CasaXPS software., Original raw data (uncorrected energies) of HAXPES spectra obtained at the HAXPES endstation of the GALAXIES beamline at SOLEIL synchrotron facility (France). Each spectrum is displayed in a two-column format, kinetic energy (X) vs. HAXPES intensity (Y). Photon energies are indicated for each figure., [FIGURE 5] HAXPES raw data of the Au 4f region in kinetic energy (X) vs. intensity (Y) columns of a 40 nm Au film (au_film_40nm), a dispersion of Au nanoparticles on a 25 nm-thick membrane in air (au_np_cell16), a dispersion of Au nanoparticles in MilliQ water (au_np_cell17) and a Au film treated with oxygen plasma and measured with 1486.6 eV photons (au_film_O2_plasma, data from DOI: 10.1021/acs.accounts.8b00241). Photon energy = 5 keV., [FIGURE 6] HAXPES raw and normalized (norm) data of the (a) N 1s, (b) O 1s, (c) C 1s and (d) F 1s lines obtained with 7 keV photons and using 20 nm thick membranes. Liquid cells filled with: air (S2), vacuum (S4), with air and with a ca 5 nm-thick amorphous carbon coating deposited in the inner part of the membrane (S7) and with 60 ml of the LP57 electrolyte (1 M LiPF6 in EC:EMC 3:7) and with the ca 5 nm-thick carbon coating (S6). The formulas used for normalization (heights normalized to their corresponding maxima) are displayed in the corresponding Y columns. In Fig. 6(d) a least-squares fit using the CasaXPS software after a Shirley-type background subtraction using a combination of Gaussian (70%) and Lorentzian (30%) functions under the constraint of identical full width at half-maximum (FWHM) for all components is shown. Raw and corrected kinetic energies are given., [FIGURE 7] HAXPES raw data of the (a) Na 1s region of a 3.5 M NaCl aqueous solution and (b) Cs 3d and (c) Cs 4d lines of a 2.6 M aqueous solution of CsCl obtained with 7 keV photons and using 15 nm membranes., [FIGURE S1] (Top) simulation of the inelastic mean free path (nm) as a function of the kinetic energy in silicon nitride using the TPP-2M model and assuming a 3.44 gr cm-3 density for silicon nitride. (Bottom) Simulated HAXPES spectra assuming a 15 nm thick silicon nitride layer on a CsCl substrate in the 3-10 keV photon energy range., European Union’s Horizon 2020 research and innovation programme, under grant agreement No. 101007417 NFFA-Europe Pilot. Spanish Ministry of Science and Innovation (MCIN) under contract No. PID2021-124568NB-I00. ICN2 is funded by the CERCA program/Generalitat de Catalunya. ICN2 is supported by the Severo Ochoa Centres of Excellence programme, grant CEX2021-001214-S, funded by MCIN/AEI. Support through the Marıa de Maeztu grant CEX2023-001397-M funded by MICIU/AEI is acknowledged. Generalitat de Catalunya through the 2021-SGR-00644 project. European Union’s Horizon 2020 research and innovation programme under grant agreement No. 957189., With funding from the Spanish government through the "Severo Ochoa Centre of Excellence" accreditation (CEX2021-001214-S)., With funding from the Spanish government through the "Severo Ochoa Centre of Excellence" accreditation (CEX2023-001397-M)., File List: Fig_5.xls; Fig_6a.xls, Fig_6b.xls, Fig_6c.xls, Fig_6d.xls, Fig_7.xls, Fig_S1.xls, Peer reviewed

Evolutionary history of the pharyngeal gene cluster with the full dataset., Peer reviewed

XRD patterns of bulk Sr2CoO3–CoO2 along with schematic crystal structure; TEM images of a partially rolled SrCoO2–CoO2; TEM and HR-STEM ADF micrographs of SrCoO2–CoO2 nanotubes synthesized at high concentration of NaOH; total density of states (DOS) for the (SrCoO2)–(CoO2)2 supercell and its projection on to the SrCoO2 and CoO2 layers; comparison of the total DOS for the (SrCoO2)–(CoO2)2 supercell with that for the (CaCoO2)–(CoO2)2 supercell., Peer reviewed

Comparing SPU (a), POC (b), PFL (c), and BFL (d) protein query to protein databases of other deuterostomes using blastp around HOX gene clusters. Each panel is a screenshot from S6 Data. The results are sorted by chromosome number followed by the position of the query IDs., Peer reviewed

Positional analysis around Hox clusters based on unidirectional BLAST. The query species is shown in the middle of each panel. The curved lines connect gene pairs of the BLAST best hits. Hox genes are labeled in gray. Up to 20 neighboring genes of anterior and posterior Hox genes are shown and labeled in blue and red, respectively. Orthologous genes that are not located in chromosomes descended from DALGs E, B2, and C2 are omitted. The full list of BLAST comparisons is provided in S6 Data. The data underlying this figure can be found in S1 Data., Peer reviewed

Numbers of all TEs (DNA + LTR + LINE + SINE) in the whole genome assembly and the Hox-bearing chromosome/scaffold of each species. The TE counts were normalized to a fixed genomic distance (10,000 bp). The data underlying this figure can be found in S1 Data., Peer reviewed

Positions of TEs in the Hox-bearing chromosomes of PYE (a) and PEC (b). All labels are consistent with S20 Fig. (TIF), Peer reviewed

Structural parameters derived from Rietveld analysis of the XRD pattern of Y2Ni7; results from EPMA for Y2Ni7; XRD patterns of Gd2Ni7 before and after PCT measurement at maximal pressure; crystallographic information (cif) files for the three deuterides structures determined by Rietveld refinement of PND data., Peer reviewed