Set de datos (Dataset).
Plant below-ground fungi interactions database for 42 Mediterranean woody plant species across Europe and North Africa
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/337067
Digital.CSIC. Repositorio Institucional del CSIC
- Dejana, Laura
- Bastida, Jesús M.
- Prieto-Rubio, Jorge
- Lendínez Contreras, Sandra
- Perea, Antonio J.
- Ramírez Serrano, Beatriz
- Alcántara, Julio M.
- Verdú, Miguel
- Montesinos-Navarro, Alicia
- Garrido Sánchez, José Luis
[Description of methods used for collection/generation of data] In order to characterize the assemblage of plant below-ground associated fungi in 42 Mediterranean woody species, we collate our own data, from molecular identification of AM (see Garrido et al. 2023 for a complete description of the methods) and EcM fungi (see Prieto et al. 2022 for a complete description of the methods), with bibliographic information containing molecular data for root-associated fungi, for the studied plant species, from MaarjAM database for AM (Opik et al. 2010) and from bibliographic review for EcM fungi. The bibliographic review for EcM molecular data was performed with the following terms: "Genus_species" AND "Ectomyco*" OR "EcM" AND "OTU" OR "VT"., Our aim was to register and characterize, through collating our own data with those from bibliographic reviews of published databases including root-associated fungi molecular data, the mycobiome of Mediterranean woody plant species across Europe and North Africa. Here, we reported a total of 439 fungus taxa associated with the roots of 42 woody species, involving 3086 plant belowground-fungus interactions., This work was funded (1) by Proyecto FEDER SUMHAL-Sustainability for Mediterranean Hospost in Andalusia integrating LifeWatch ERIC [Work Package 5. Task 5.1.2. Development of the data standard. Repository development.] (LifeWatch ERIC – FEDER, POPE 2014-2020; Ministerio de Ciencia e Innovación, Spain); (2) Proyecto COEXMED I: Coexistence of woody plants in Mediterranena forests: intransitive interactions and negative density dependence in recruitment dynamics (CGL2012-36776, FEDER y Ministerio de Economia y Competitividad, Spain); (3) Proyecto COEXMED II: Especificidad de las interacciones adulto-juvenil durante el reclutamiento de plantas leñosas: complementariedad de caracteres funcionales e interacciones plant-antagonista (CGL2015-69118-C2-1-P, FEDER y Ministerio de Economia y Competitividad, Spain); (4) Proyecto REPNETS-Redes de reemplazamiento en bosques: variación ecogeográfica e influencia de las comunidades de hongos de la filosfera y de las interacciones planta-suelo (PGC2018-100966-B-I00, FEDER - Agencia Estatal de Investigación, Ministerio de Ciencia e Innovación, Spain); (5) CSIC is acknowledged for supporting Open Access publication., Plant_below-ground_fungi_interactions_database_for_42_Mediterranean_woody_species_across_Europe_and_North_Africa.csv [shows root-associated fungus interactions, determined by molecular techniques, for 42 Mediterranean woody species] Plant_taxonomic_info.csv [shows the list of woody plant species with their taxonomic adscription Class/Order/Family/Genus] Metadata.csv [records information about the meaning of columns in 'Plant_below-ground_fungi_interactions_database_for_42_Mediterranean_woody_species_across_Europe_and_North_Africa.csv' and 'Plant_taxonomic_info.csv ' files], Peer reviewed
DOI: http://hdl.handle.net/10261/337067, https://doi.org/10.20350/digitalCSIC/15634
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/337067
HANDLE: http://hdl.handle.net/10261/337067, https://doi.org/10.20350/digitalCSIC/15634
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/337067
Ver en: http://hdl.handle.net/10261/337067, https://doi.org/10.20350/digitalCSIC/15634
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/337067
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1 Versiones
1 Versiones
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/337067
Set de datos (Dataset). 2023
PLANT BELOW-GROUND FUNGI INTERACTIONS DATABASE FOR 42 MEDITERRANEAN WOODY PLANT SPECIES ACROSS EUROPE AND NORTH AFRICA
Digital.CSIC. Repositorio Institucional del CSIC
- Dejana, Laura
- Bastida, Jesús M.
- Prieto-Rubio, Jorge
- Lendínez Contreras, Sandra
- Perea, Antonio J.
- Ramírez Serrano, Beatriz
- Alcántara, Julio M.
- Verdú, Miguel
- Montesinos-Navarro, Alicia
- Garrido Sánchez, José Luis
[Description of methods used for collection/generation of data] In order to characterize the assemblage of plant below-ground associated fungi in 42 Mediterranean woody species, we collate our own data, from molecular identification of AM (see Garrido et al. 2023 for a complete description of the methods) and EcM fungi (see Prieto et al. 2022 for a complete description of the methods), with bibliographic information containing molecular data for root-associated fungi, for the studied plant species, from MaarjAM database for AM (Opik et al. 2010) and from bibliographic review for EcM fungi. The bibliographic review for EcM molecular data was performed with the following terms: "Genus_species" AND "Ectomyco*" OR "EcM" AND "OTU" OR "VT"., Our aim was to register and characterize, through collating our own data with those from bibliographic reviews of published databases including root-associated fungi molecular data, the mycobiome of Mediterranean woody plant species across Europe and North Africa. Here, we reported a total of 439 fungus taxa associated with the roots of 42 woody species, involving 3086 plant belowground-fungus interactions., This work was funded (1) by Proyecto FEDER SUMHAL-Sustainability for Mediterranean Hospost in Andalusia integrating LifeWatch ERIC [Work Package 5. Task 5.1.2. Development of the data standard. Repository development.] (LifeWatch ERIC – FEDER, POPE 2014-2020; Ministerio de Ciencia e Innovación, Spain); (2) Proyecto COEXMED I: Coexistence of woody plants in Mediterranena forests: intransitive interactions and negative density dependence in recruitment dynamics (CGL2012-36776, FEDER y Ministerio de Economia y Competitividad, Spain); (3) Proyecto COEXMED II: Especificidad de las interacciones adulto-juvenil durante el reclutamiento de plantas leñosas: complementariedad de caracteres funcionales e interacciones plant-antagonista (CGL2015-69118-C2-1-P, FEDER y Ministerio de Economia y Competitividad, Spain); (4) Proyecto REPNETS-Redes de reemplazamiento en bosques: variación ecogeográfica e influencia de las comunidades de hongos de la filosfera y de las interacciones planta-suelo (PGC2018-100966-B-I00, FEDER - Agencia Estatal de Investigación, Ministerio de Ciencia e Innovación, Spain); (5) CSIC is acknowledged for supporting Open Access publication., Plant_below-ground_fungi_interactions_database_for_42_Mediterranean_woody_species_across_Europe_and_North_Africa.csv [shows root-associated fungus interactions, determined by molecular techniques, for 42 Mediterranean woody species] Plant_taxonomic_info.csv [shows the list of woody plant species with their taxonomic adscription Class/Order/Family/Genus] Metadata.csv [records information about the meaning of columns in 'Plant_below-ground_fungi_interactions_database_for_42_Mediterranean_woody_species_across_Europe_and_North_Africa.csv' and 'Plant_taxonomic_info.csv ' files], Peer reviewed
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1 Documentos relacionados
1 Documentos relacionados
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/337067
Set de datos (Dataset). 2023
PLANT BELOW-GROUND FUNGI INTERACTIONS DATABASE FOR 42 MEDITERRANEAN WOODY PLANT SPECIES ACROSS EUROPE AND NORTH AFRICA
Digital.CSIC. Repositorio Institucional del CSIC
- Dejana, Laura
- Bastida, Jesús M.
- Prieto-Rubio, Jorge
- Lendínez Contreras, Sandra
- Perea, Antonio J.
- Ramírez Serrano, Beatriz
- Alcántara, Julio M.
- Verdú, Miguel
- Montesinos-Navarro, Alicia
- Garrido Sánchez, José Luis
[Description of methods used for collection/generation of data] In order to characterize the assemblage of plant below-ground associated fungi in 42 Mediterranean woody species, we collate our own data, from molecular identification of AM (see Garrido et al. 2023 for a complete description of the methods) and EcM fungi (see Prieto et al. 2022 for a complete description of the methods), with bibliographic information containing molecular data for root-associated fungi, for the studied plant species, from MaarjAM database for AM (Opik et al. 2010) and from bibliographic review for EcM fungi. The bibliographic review for EcM molecular data was performed with the following terms: "Genus_species" AND "Ectomyco*" OR "EcM" AND "OTU" OR "VT"., Our aim was to register and characterize, through collating our own data with those from bibliographic reviews of published databases including root-associated fungi molecular data, the mycobiome of Mediterranean woody plant species across Europe and North Africa. Here, we reported a total of 439 fungus taxa associated with the roots of 42 woody species, involving 3086 plant belowground-fungus interactions., This work was funded (1) by Proyecto FEDER SUMHAL-Sustainability for Mediterranean Hospost in Andalusia integrating LifeWatch ERIC [Work Package 5. Task 5.1.2. Development of the data standard. Repository development.] (LifeWatch ERIC – FEDER, POPE 2014-2020; Ministerio de Ciencia e Innovación, Spain); (2) Proyecto COEXMED I: Coexistence of woody plants in Mediterranena forests: intransitive interactions and negative density dependence in recruitment dynamics (CGL2012-36776, FEDER y Ministerio de Economia y Competitividad, Spain); (3) Proyecto COEXMED II: Especificidad de las interacciones adulto-juvenil durante el reclutamiento de plantas leñosas: complementariedad de caracteres funcionales e interacciones plant-antagonista (CGL2015-69118-C2-1-P, FEDER y Ministerio de Economia y Competitividad, Spain); (4) Proyecto REPNETS-Redes de reemplazamiento en bosques: variación ecogeográfica e influencia de las comunidades de hongos de la filosfera y de las interacciones planta-suelo (PGC2018-100966-B-I00, FEDER - Agencia Estatal de Investigación, Ministerio de Ciencia e Innovación, Spain); (5) CSIC is acknowledged for supporting Open Access publication., Plant_below-ground_fungi_interactions_database_for_42_Mediterranean_woody_species_across_Europe_and_North_Africa.csv [shows root-associated fungus interactions, determined by molecular techniques, for 42 Mediterranean woody species] Plant_taxonomic_info.csv [shows the list of woody plant species with their taxonomic adscription Class/Order/Family/Genus] Metadata.csv [records information about the meaning of columns in 'Plant_below-ground_fungi_interactions_database_for_42_Mediterranean_woody_species_across_Europe_and_North_Africa.csv' and 'Plant_taxonomic_info.csv ' files], Peer reviewed
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