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Supplementary files of the article Tissue-specific chromatin-binding patterns of Caenorhabditis elegans heterochromatin proteins HPL-1 and HPL-2 reveal differential roles in the regulation of gene expresión (Dataset)

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/351951
Digital.CSIC. Repositorio Institucional del CSIC
  • Cruz, Patricia de la
  • Rodríguez-Palero, María Jesús
  • Askjaer, Peter
  • Artal-Sanz, Marta
Supplementary_File_1_HP1_peaks Supplementary_File_2_HP1_gene_tissues Supplementary_File_3_Overlapping between HP1 bound genes with tissue-specific genes Supplementary_File_4_Overlapping between tissue-specific genes bound by HP1 proteins Supplemental Figures and Tables, Peer reviewed
 
DOI: http://hdl.handle.net/10261/351951
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/351951

HANDLE: http://hdl.handle.net/10261/351951
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/351951
 
Ver en: http://hdl.handle.net/10261/351951
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/351951

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/351951
Set de datos (Dataset). 2023

SUPPLEMENTARY FILES OF THE ARTICLE TISSUE-SPECIFIC CHROMATIN-BINDING PATTERNS OF CAENORHABDITIS ELEGANS HETEROCHROMATIN PROTEINS HPL-1 AND HPL-2 REVEAL DIFFERENTIAL ROLES IN THE REGULATION OF GENE EXPRESIÓN (DATASET)

Digital.CSIC. Repositorio Institucional del CSIC
  • Cruz, Patricia de la
  • Rodríguez-Palero, María Jesús
  • Askjaer, Peter
  • Artal-Sanz, Marta
Supplementary_File_1_HP1_peaks Supplementary_File_2_HP1_gene_tissues Supplementary_File_3_Overlapping between HP1 bound genes with tissue-specific genes Supplementary_File_4_Overlapping between tissue-specific genes bound by HP1 proteins Supplemental Figures and Tables, Peer reviewed




Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/311166
Set de datos (Dataset). 2022

SUPPLEMENTARY FILES OF THE ARTICLE "NOVEL GENES AND SEX DIFFERENCES IN COVID-19 SEVERITY" [DATASET]

Digital.CSIC. Repositorio Institucional del CSIC
  • Cruz Modino, Raquel de la
  • Diz-de Almeida, Silvia
  • López de Heredia, Miguel
  • Quintela, Inés
  • Ceballos, Francisco C.
  • Pita, Guillermo
  • Lorenzo-Salazar, José M.
  • González-Montelongo, Rafaela
  • Gago-Dominguez, Manuela
  • Sevilla Porras, Marta
  • Tenorio Castaño, Jair Antonio
  • Carbonell, Cristina
  • Migeotte, Isabelle
  • Renieri, Alessandra
  • Aguilera-Albesa, Sergio
  • Planas, Anna M.
  • Ludwig, Kerstin U.
  • Buti, María
  • Rahmouni, Souad
  • Alarcón-Riquelme, M. E.
  • Schulte, Eva C.
  • Tamayo-Velasco, Álvaro
  • Franke, Andre
  • Castaño, Luis
  • Karlsen, Tom H.
  • Valenti, Luca
  • Zeberg, Hugo
  • Almadana Pacheco, Virginia
  • Richards, Brent
  • Ganna, Andrea
  • Boada, Mercè
  • Rojas, Itziar de
  • Gil-Fournier, Belén
  • Ruiz, Agustín
  • Sánchez-Juan, Pascual
  • Castelao, Jose E.
  • Real, Luis Miguel
  • SCOURGE Cohort Group
  • HOSTAGE Cohort Group
  • GRA@CE Cohort Group
  • Almoguera, Berta
  • Guillen-Navarro, Encarna
  • Ayuso, Carmen
  • Gómez-Arrue, Javier
  • González-Neira, Anna
  • Riancho, José A.
  • Rojas-Martinez, Augusto
  • Conde-Vicente, Rosa
  • Flores, Carlos
  • Lapunzina, Pablo
  • Carracedo, Ángel
  • Álvarez, Nuria
  • Andreu-Bernabeu, Álvaro
  • Arana-Arri, Eunate
  • González Álvarez, Beatriz
  • Arango, Celso
  • Arranz, Maria J.
  • Artiga, María Jesús
  • Baptista-Rosas, Raúl C.
  • Cordero-Lorenzana, M. Lourdes
  • Barreda-Sánchez, María
  • Belhassen-García, Moncef
  • Bezerra, Joao F.
  • Bezerra, Marcos A. C.
  • Boix-Palop, Lucía
  • Gonzalez Bernaldo de Quirós, Fernán
  • Briones, María
  • Brugada, Ramón
  • Bustos, Matilde
  • Cortés-Sánchez, José L.
  • Cortón, Marta
  • Darnaude, M. Teresa
  • Martino-Rodríguez, Alba de
  • Tamayo, Eduardo
  • Campo-Pérez, Víctor de
  • Diaz de Bustamante, Aranzazu
  • González-Peñas, Javier
  • Domínguez-Garrido, Elena
  • Luchessi, Andre D.
  • Eiros, Rocío
  • Estigarribia Sanabria, Gladys Mercedes
  • Fariñas, María del Carmen
  • Fernández-Robelo, Uxía
  • Fernández-Rodríguez, Amanda
  • Fernández-Villa, Tania
  • Gutiérrez-Bautista, Juan F.
  • Herrero, María José
  • Herrero-Gonzalez, Antonio
  • Jiménez-Sousa, María A.
  • Aguado, José María
  • Lattig, María Claudia
  • Taracido-Fernandez, Juan Carlos
  • Liger Borja, Anabel
  • López-Rodríguez, Rosario
  • Mancebo, Esther
  • Martín-López, Caridad
  • Martín, Vicente
  • Martínez-Nieto, Oscar
  • Martinez-López, Icíar
  • Martinez-Resendez, Michel F.
  • Amitrano, Sara
  • Martínez-Pérez, Àngel
  • Mazzeu, Juliana F
  • Teper, Alejandro
  • Merayo Macías, Eleuterio
  • Mínguez, Pablo
  • Moreno Cuerda, Víctor
  • Silbiger, Vivian N.
  • Oliveira, Silviene F.
  • Ortega-Paino, Eva
  • Parellada, Mara
  • Roade, Luisa
  • Paz-Artal, Estela
  • Santos, Ney P. C.
  • Pérez-Matute, Patricia
  • Torres-Tobar, Lilian
  • Pérez Ramírez, Patricia
  • Pérez-Tomás, M. Elena
  • Perucho, Teresa
  • Pinsach-Abuin, Mel Lina
  • Pompa-Mera, Ericka N.
  • Porras-Hurtado, Gloria L.
  • Fava, Francesca
  • Pujol, Aurora
  • Ramiro León, Soraya
  • Resino, Salvador
  • Fernandes, Marianne R.
  • Urioste, Miguel
  • Rodríguez-Ruiz, Emilio
  • Rodríguez-Artalejo, Fernando
  • Rodriguez-Garcia, José A.
  • Ruiz Cabello, Francisco
  • Ruiz-Hornillos, Javier
  • Spinner, Christoph D.
  • Ryan, Pablo
  • Soria, José Manuel
  • Souto, Juan Carlos
  • Valencia-Ramos, Juan
  • Yáñez, Zuleima
  • Zarate, Ruth
  • Nakanishi, Tomoko
  • Nevado, Julian
  • Pigazzini, Sara
  • Degenhardt, Frauke
  • Prati, Daniele
  • Butler-Laporte, Guillaume
  • Maya-Miles, Douglas
  • Bujanda, Luis
  • Bouysran, Youssef
  • Palom, Adriana
  • Ellinghaus, David
  • Martínez-Bueno, Manuel
  • Rolker, Selina
  • Bernardo, David
  • García, Federico
  • Darcis, Gilles
  • Fernández-Cadenas, Israel
  • Calderón, Enrique J.
  • Holter, Jan Cato
  • Aguilar, Carlos
  • Banales, Jesús M.
  • Frithiof, Robert
  • Duga, Stefano
  • Asselta, Rosanna
  • Costa Pereira, Alexandre de
  • Romero-Gómez, Manuel
  • Nafría-Jiménez, Beatriz
  • Hov, Johannes R.
Table of Content 1. Supplemental Figures 2. Supplemental Note a. Research electronic data capture (REDCap) b. Genetic risk score and multinomial regression on severity scale c. Evaluating the associations of leading SNPs in relation with comorbidities d. Measuring genome-specific effects on COVID-19 severity and hospitalization 3. Supplemental references 4. A full list of cohort members and affiliations a. SCOURGE cohort group b. HOSTAGE cohort group c. GR@ACE cohort group, Peer reviewed




Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/329639
Set de datos (Dataset). 2022

SUPPLEMENTARY FILES OF THE ARTICLE IBRUTINIB IN COMBINATION WITH RITUXIMAB FOR INDOLENT CLINICAL FORMS OF MANTLE CELL LYMPHOMA (IMCL-2015): A MULTICENTER, OPEN-LABEL, SINGLE-ARM, PHASE II TRIAL [DATASET]

Digital.CSIC. Repositorio Institucional del CSIC
  • Giné, Eva
  • Cruz, Fátima de la
  • Jiménez-Ubieto, Ana
  • López Jiménez, Javier
  • García-Sancho, Alejandro Martín
  • Terol, María José
  • González-Barca, Eva
  • Casanova, María
  • Fuente, Adolfo de la
  • Marín-Niebla, Ana
  • Muntañola, Ana
  • González-López, Tomás J.
  • Aymerich, Marta
  • Setoain, Xavier
  • Cortés-Romera, Montserrat
  • Rotger, Amanda
  • Rodríguez, Sonia
  • Medina, Alejandro
  • García-Sanz, Ramón
  • Nadeu, Ferran
  • Beà, Silvia
  • Campo, Elías
  • López-Guillermo, Armando
SUPPLEMENTAL MATERIAL 1.- Description of genetic analyses performed in the IMCL-2015 study 2.- Treatment discontinuation events and relationship with IR combination 3.- Supplemental Table S1 . Histological review according to the tissue sample 4.- Supplemental Table S2. Clinical and biological features according to TP53 mutational status 5.- Supplemental Table S3. Clinical and biological features according to nnMCL or cMCL molecular subtypes 6.- Supplemental Table S4. Responses after 12 cycles of IR combination according to genomic complexity 7.- Supplemental Table S5. Molecular response in peripheral blood and bone marrow at 6,12, 18 and 24 months 8.- Supplemental Figure S1. PFS from the time of ibrutinib stop in patients in response and sustained undetectable MRD 9.- Supplemental Figure S2. PFS according to MRD status at PB (Cycle 12) 10.- Supplemental Figure S3. A) OS by MIPI and B) OS by TP53 mutational status 2 Supplemental Figure Legends Supplemental Figure S1. PFS from the time of ibrutinib stop in patients in response and sustained undetectable MRD PFS, progression-free survival; MRD, minimal residual disease Supplemental Figure S2. PFS according to MRD status at PB (Cycle 12) (P=.063) PFS, progression-free survival ;MRD, minimal residual disease; PB, peripheral blood Supplemental Figure S3. A) OS by MIPI (P= .007) and B) OS by TP53 mutational status (P= .0002) OS, overall survival; MIPI, Mantle cell lymphoma International Prognostic Index; wt, wild-type; mut, mutated, Peer reviewed




Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/351951
Set de datos (Dataset). 2023

SUPPLEMENTARY FILES OF THE ARTICLE TISSUE-SPECIFIC CHROMATIN-BINDING PATTERNS OF CAENORHABDITIS ELEGANS HETEROCHROMATIN PROTEINS HPL-1 AND HPL-2 REVEAL DIFFERENTIAL ROLES IN THE REGULATION OF GENE EXPRESIÓN (DATASET)

Digital.CSIC. Repositorio Institucional del CSIC
  • Cruz, Patricia de la
  • Rodríguez-Palero, María Jesús
  • Askjaer, Peter
  • Artal-Sanz, Marta
Supplementary_File_1_HP1_peaks Supplementary_File_2_HP1_gene_tissues Supplementary_File_3_Overlapping between HP1 bound genes with tissue-specific genes Supplementary_File_4_Overlapping between tissue-specific genes bound by HP1 proteins Supplemental Figures and Tables, Peer reviewed




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