Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/363009
Software de investigación. Otros (Other). 2018

BENCHMARKING OPTIMIZATION METHODS FOR PARAMETER ESTIMATION IN LARGE KINETIC MODELS [SOFTWARE]

Digital.CSIC. Repositorio Institucional del CSIC
  • Villaverde, A. F.
  • Fröhlich, Fabian
  • Weindl, Daniel
  • Hasenauer, Jan
  • Banga, Julio R.
Includes two MATLAB toolboxes: AMICI and MEIGO, as well as MATLAB code to define the optimizations and to report the results as figures, tables, and summary files, Software to reproduce the results presented in the paper "Benchmarking optimization methods for parameter estimation in large kinetic models", CanPathPro – Generation of the CanPath prototype - a platform for predictive cancer pathway modeling 686282, European Commission, Documentation_supplement.pdf.-- Results_supplement.pdf.-- SOFTWARE_SUPPLEMENT.zip, Peer reviewed




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