Dataset.
Epigenome-wide analysis reveals specific DNA hypermethylation of T cells during human hematopoietic differentiation
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/235141
Digital.CSIC. Repositorio Institucional del CSIC
- Tejedor, Juan Ramón
- Bueno, Clara
- Cobo, Isabel
- Bayón, Gustavo F.
- Prieto López, Cristina
- Mangas, Cristina
- Pérez, Raúl F.
- Santamarina-Ojeda, Pablo
- Urdinguio, Rocío G.
- Menéndez, Pablo
- Fraga, Mario F.
- Fernández, Agustín F.
Supplementary figures and supplementary data tables from MethylationEPIC arrays (Tejedor et al), plus a compiled dataset including raw methylation intensities, processed β-values and Phenotypic data from HumanMethylation450 arrays collected from datasets GSE63409, GSE49618, GSE88824 and GSE49031, and HumanMethylationEPIC arrays deposited in E-MTAB-6315 entry from ArrayExpress., Epigenetic regulation plays an important role in cellular development and differentiation. A detailed map of the DNA methylation dynamics that occur during cell differentiation would contribute to decipher the molecular networks governing cell fate commitment. In this study we used the most recent Illumina MethylationEPIC Beadchip platform to describe the genome-wide DNA methylation changes observed throughout hematopoietic maturation by analyzing multiple hematopoietic cell types at different developmental stages., Grants: European Commission: INFANTLEUKEMIA - GENOMIC, CELLULAR AND DEVELOPMENTAL RECONSTRUCTION OFINFANT MLL-AF4+ ACUTE LYMPHOBLASTIC LEUKEMIA (646903)., Peer reviewed
Proyecto:
EC/H2020/646903
DOI: http://hdl.handle.net/10261/235141
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/235141
HANDLE: http://hdl.handle.net/10261/235141
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/235141
Ver en: http://hdl.handle.net/10261/235141
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/235141
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1 Documentos relacionados
1 Documentos relacionados
r-IGTP. Repositorio Institucional de Producción Científica del Instituto de Investigación Germans Trias i Pujol
oai:fundanet.igtp.cat:p5591
Artículo científico (article). 2018
EPIGENOME-WIDE ANALYSIS REVEALS SPECIFIC DNA HYPERMETHYLATION OF T CELLS DURING HUMAN HEMATOPOIETIC DIFFERENTIATION
r-IGTP. Repositorio Institucional de Producción Científica del Instituto de Investigación Germans Trias i Pujol
- Tejedor, JR
- Bueno, C
- Cobo, I
- Bayon, GF
- Prieto, C
- Mangas, C
- Perez, RF
- Santamarina, P
- Urdinguio, RG
- Menendez, P
- Fraga, MF
- Fernandez, AF
Aim: Epigenetic regulation plays an important role in cellular development and differentiation. A detailed map of the DNA methylation dynamics that occur during cell differentiation would contribute to decipher the molecular networks governing cell fate commitment. Methods: Illumina Methylation EPIC BeadChip platform was used to describe the genome-wide DNA methylation changes observed throughout hematopoietic maturation by analyzing multiple myeloid and lymphoid hematopoietic cell types. Results: We identified a plethora of DNA methylation changes that occur during human hematopoietic differentiation. We observed that T lymphocytes display substantial enhancement of de novo CpG hypermethylation as compared with other hematopoietic cell populations. T-cell-specific hypermethylated regions were strongly associated with open chromatin marks and enhancer elements, as well as binding sites of specific key transcription factors involved in hematopoietic differentiation, such as PU. 1 and TAL1. Conclusion: These results provide novel insights into the role of DNA methylation at enhancer elements in T-cell development.
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1 Versiones
1 Versiones
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/235141
Dataset. 2017
EPIGENOME-WIDE ANALYSIS REVEALS SPECIFIC DNA HYPERMETHYLATION OF T CELLS DURING HUMAN HEMATOPOIETIC DIFFERENTIATION
Digital.CSIC. Repositorio Institucional del CSIC
- Tejedor, Juan Ramón
- Bueno, Clara
- Cobo, Isabel
- Bayón, Gustavo F.
- Prieto López, Cristina
- Mangas, Cristina
- Pérez, Raúl F.
- Santamarina-Ojeda, Pablo
- Urdinguio, Rocío G.
- Menéndez, Pablo
- Fraga, Mario F.
- Fernández, Agustín F.
Supplementary figures and supplementary data tables from MethylationEPIC arrays (Tejedor et al), plus a compiled dataset including raw methylation intensities, processed β-values and Phenotypic data from HumanMethylation450 arrays collected from datasets GSE63409, GSE49618, GSE88824 and GSE49031, and HumanMethylationEPIC arrays deposited in E-MTAB-6315 entry from ArrayExpress., Epigenetic regulation plays an important role in cellular development and differentiation. A detailed map of the DNA methylation dynamics that occur during cell differentiation would contribute to decipher the molecular networks governing cell fate commitment. In this study we used the most recent Illumina MethylationEPIC Beadchip platform to describe the genome-wide DNA methylation changes observed throughout hematopoietic maturation by analyzing multiple hematopoietic cell types at different developmental stages., Grants: European Commission: INFANTLEUKEMIA - GENOMIC, CELLULAR AND DEVELOPMENTAL RECONSTRUCTION OFINFANT MLL-AF4+ ACUTE LYMPHOBLASTIC LEUKEMIA (646903)., Peer reviewed
Proyecto: EC/H2020/646903
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