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Supplementary Material Riboflavin kinase and pyridoxine 5'-phosphate oxidase complex formation envisages transient interactions for FMN cofactor delivery

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/339339
Digital.CSIC. Repositorio Institucional del CSIC
  • Rivero, Maribel
  • Boneta, Sergio
  • Novo, Nerea
  • Velázquez-Campoy, Adrián
  • Polo, Victor
  • Medina, Milagros
18 pages. -- Supplementary Figures and Tables. -- Figure S1. Quality parameters for the MD simulations of RFK in complex with the products of its reaction. -- Figure S2. Impact of the starting conformation of RFK in complex with the products of its reaction on the MD trajectories of selected features. -- Figure S3. The conformational space of aPNPOx in monomer (left panels) and homodimer (right panels) states. -- Figure S4. Docking of hRFKop (1P4M) and hRFKcl (1Q9S) crystal structures to PNPOx crystallographic model. -- igure S5. Quality parameters for the MD simulations of hRFK:aPNPOx interaction models. -- Figure S6. MD simulations of hRFKop:aPNPOx putative interaction models. -- Figure S7. MD simulations of hRFKcl:aPNPOx putative interaction models. -- Figure S8. The aPNPOx interaction surface. -- Figure S9. Detail of the molecular coupling of hRFKop to aPNPOx in a representative model (R3). -- Figure S10. Detail of the molecular coupling of hRFKcl to aPNPOx in a representative model (R3). -- Figure S11. RFK and PNPOx protein:protein interactions networks retrieved from the BioGrid server (https://thebiogrid.org/). -- Table S1. Human FMN-dependent flavoproteins., Peer reviewed
 
DOI: http://hdl.handle.net/10261/339339
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/339339

HANDLE: http://hdl.handle.net/10261/339339
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/339339
 
Ver en: http://hdl.handle.net/10261/339339
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/339339

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/339339
Set de datos (Dataset). 2023

SUPPLEMENTARY MATERIAL RIBOFLAVIN KINASE AND PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEX FORMATION ENVISAGES TRANSIENT INTERACTIONS FOR FMN COFACTOR DELIVERY

Digital.CSIC. Repositorio Institucional del CSIC
  • Rivero, Maribel
  • Boneta, Sergio
  • Novo, Nerea
  • Velázquez-Campoy, Adrián
  • Polo, Victor
  • Medina, Milagros
18 pages. -- Supplementary Figures and Tables. -- Figure S1. Quality parameters for the MD simulations of RFK in complex with the products of its reaction. -- Figure S2. Impact of the starting conformation of RFK in complex with the products of its reaction on the MD trajectories of selected features. -- Figure S3. The conformational space of aPNPOx in monomer (left panels) and homodimer (right panels) states. -- Figure S4. Docking of hRFKop (1P4M) and hRFKcl (1Q9S) crystal structures to PNPOx crystallographic model. -- igure S5. Quality parameters for the MD simulations of hRFK:aPNPOx interaction models. -- Figure S6. MD simulations of hRFKop:aPNPOx putative interaction models. -- Figure S7. MD simulations of hRFKcl:aPNPOx putative interaction models. -- Figure S8. The aPNPOx interaction surface. -- Figure S9. Detail of the molecular coupling of hRFKop to aPNPOx in a representative model (R3). -- Figure S10. Detail of the molecular coupling of hRFKcl to aPNPOx in a representative model (R3). -- Figure S11. RFK and PNPOx protein:protein interactions networks retrieved from the BioGrid server (https://thebiogrid.org/). -- Table S1. Human FMN-dependent flavoproteins., Peer reviewed




Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/339339
Set de datos (Dataset). 2023

SUPPLEMENTARY MATERIAL RIBOFLAVIN KINASE AND PYRIDOXINE 5'-PHOSPHATE OXIDASE COMPLEX FORMATION ENVISAGES TRANSIENT INTERACTIONS FOR FMN COFACTOR DELIVERY

Digital.CSIC. Repositorio Institucional del CSIC
  • Rivero, Maribel
  • Boneta, Sergio
  • Novo, Nerea
  • Velázquez-Campoy, Adrián
  • Polo, Victor
  • Medina, Milagros
18 pages. -- Supplementary Figures and Tables. -- Figure S1. Quality parameters for the MD simulations of RFK in complex with the products of its reaction. -- Figure S2. Impact of the starting conformation of RFK in complex with the products of its reaction on the MD trajectories of selected features. -- Figure S3. The conformational space of aPNPOx in monomer (left panels) and homodimer (right panels) states. -- Figure S4. Docking of hRFKop (1P4M) and hRFKcl (1Q9S) crystal structures to PNPOx crystallographic model. -- igure S5. Quality parameters for the MD simulations of hRFK:aPNPOx interaction models. -- Figure S6. MD simulations of hRFKop:aPNPOx putative interaction models. -- Figure S7. MD simulations of hRFKcl:aPNPOx putative interaction models. -- Figure S8. The aPNPOx interaction surface. -- Figure S9. Detail of the molecular coupling of hRFKop to aPNPOx in a representative model (R3). -- Figure S10. Detail of the molecular coupling of hRFKcl to aPNPOx in a representative model (R3). -- Figure S11. RFK and PNPOx protein:protein interactions networks retrieved from the BioGrid server (https://thebiogrid.org/). -- Table S1. Human FMN-dependent flavoproteins., Peer reviewed




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