Dataset.

Data from: A key metabolic gene for recurrent freshwater colonization and radiation in fishes

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/283938
Digital.CSIC. Repositorio Institucional del CSIC
  • Ishikawa, Asano
  • Kabeya, Naoki
  • Ikeya, Koki
  • Kakioka, Ryo
  • Cech, Jennifer N.
  • Osada, Naoki
  • Leal, Miguel C.
  • Inoue, Jun
  • Kume, Manabu
  • Toyoda, Atsushi
  • Tezuka, Ayumi
  • Nagano, Atsushi J.
  • Yamasaki, Yo Y.
  • Suzuki, Yuto
  • Kokita, Tomoyuki
  • Takahashi, Hiroshi
  • Lucek, Kay
  • Marques, David
  • Takehana, Yusuke
  • Naruse, Kiyoshi
  • Mori, Seiichi
  • Monroig, Óscar
  • Ladd, Nemiah
  • Schubert, Carsten J.
  • Matthews, Blake
  • Peichel, Catherine L.
  • Seehausen, Ole
  • Yoshizaki, Goro
  • Kitano, Jun
[Usage Notes] DHA meta-analysis data Percentage of DHA in total fatty acid were obtained from literatures. DHA contents in algae and consumers from marine and freshwater habitats were analyzed. DHA.csv, Colonization of new ecological niches has triggered large adaptive radiations. Although some lineages have made use of such opportunities, not all do so. The factors causing this variation among lineages are largely unknown. Here, we show that deficiency in docosahexaenoic acid (DHA), an essential ω-3 fatty acid, can constrain freshwater colonization by marine fishes. Our genomic analyses revealed multiple independent duplications of the fatty acid desaturase gene Fads2 in stickleback lineages that subsequently colonized and radiated in freshwater habitats, but not in close relatives that failed to colonize. Transgenic manipulation of Fads2 in marine stickleback increased their ability to synthesize DHA and survive on DHA-deficient diets. Multiple freshwater ray-finned fishes also show a convergent increase in Fads2 copies, indicating its key role in freshwater colonization., Peer reviewed
 
DOI: http://hdl.handle.net/10261/283938, http://datadryad.org/stash/dataset/doi:10.5061/dryad.14rf353
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/283938

HANDLE: http://hdl.handle.net/10261/283938, http://datadryad.org/stash/dataset/doi:10.5061/dryad.14rf353
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/283938
 
Ver en: http://hdl.handle.net/10261/283938, http://datadryad.org/stash/dataset/doi:10.5061/dryad.14rf353
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/283938

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/283938
Dataset. 2019

DATA FROM: A KEY METABOLIC GENE FOR RECURRENT FRESHWATER COLONIZATION AND RADIATION IN FISHES

Digital.CSIC. Repositorio Institucional del CSIC
  • Ishikawa, Asano
  • Kabeya, Naoki
  • Ikeya, Koki
  • Kakioka, Ryo
  • Cech, Jennifer N.
  • Osada, Naoki
  • Leal, Miguel C.
  • Inoue, Jun
  • Kume, Manabu
  • Toyoda, Atsushi
  • Tezuka, Ayumi
  • Nagano, Atsushi J.
  • Yamasaki, Yo Y.
  • Suzuki, Yuto
  • Kokita, Tomoyuki
  • Takahashi, Hiroshi
  • Lucek, Kay
  • Marques, David
  • Takehana, Yusuke
  • Naruse, Kiyoshi
  • Mori, Seiichi
  • Monroig, Óscar
  • Ladd, Nemiah
  • Schubert, Carsten J.
  • Matthews, Blake
  • Peichel, Catherine L.
  • Seehausen, Ole
  • Yoshizaki, Goro
  • Kitano, Jun
[Usage Notes] DHA meta-analysis data Percentage of DHA in total fatty acid were obtained from literatures. DHA contents in algae and consumers from marine and freshwater habitats were analyzed. DHA.csv, Colonization of new ecological niches has triggered large adaptive radiations. Although some lineages have made use of such opportunities, not all do so. The factors causing this variation among lineages are largely unknown. Here, we show that deficiency in docosahexaenoic acid (DHA), an essential ω-3 fatty acid, can constrain freshwater colonization by marine fishes. Our genomic analyses revealed multiple independent duplications of the fatty acid desaturase gene Fads2 in stickleback lineages that subsequently colonized and radiated in freshwater habitats, but not in close relatives that failed to colonize. Transgenic manipulation of Fads2 in marine stickleback increased their ability to synthesize DHA and survive on DHA-deficient diets. Multiple freshwater ray-finned fishes also show a convergent increase in Fads2 copies, indicating its key role in freshwater colonization., Peer reviewed





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