. 2022

Supplementary Materials of Annex I. High throughput stationary 13C-based Metabolic Flux Analysis of Pichia pastoris strains. PhD Thesis Albert Fina Romero

Dipòsit Digital de Documents de la UAB
oai:ddd.uab.cat:263045
Dipòsit Digital de Documents de la UAB
  • Fina Romero, Albert|||0000-0001-7949-0484
  • Ferrer, Pau|||0000-0002-5287-4127
  • Albiol i Sala, Joan|||0000-0001-5626-429X
Supplementary materials to the protocol describing High Throughput Stationary 13C-Metabolic Flux Analysis in Pichia pastoris. This protocol is published in Annex 1 of Albert Fina's PhD thesis. The attached contain relevant information and scripts which are used for: Compression of a Genome Scale Metabolic Model of Pichia pastoris into a core model using Matlab. Translation of the core model into a FTBL format core model, which is the input model for the python-based software influx_si. Modification of the core FTBL model to generate an input model for IsoDesign (a software for the optimization of the C-source for 13C-Metabolic Flux Analysis).
 

DOI: https://ddd.uab.cat/record/263045, https://dx.doi.org/10.5565/ddd.uab.cat/263045
Dipòsit Digital de Documents de la UAB
oai:ddd.uab.cat:263045

HANDLE: https://ddd.uab.cat/record/263045, https://dx.doi.org/10.5565/ddd.uab.cat/263045
Dipòsit Digital de Documents de la UAB
oai:ddd.uab.cat:263045
 
Ver en: https://ddd.uab.cat/record/263045, https://dx.doi.org/10.5565/ddd.uab.cat/263045
Dipòsit Digital de Documents de la UAB
oai:ddd.uab.cat:263045

Dipòsit Digital de Documents de la UAB
oai:ddd.uab.cat:263045
. 2022

SUPPLEMENTARY MATERIALS OF ANNEX I. HIGH THROUGHPUT STATIONARY 13C-BASED METABOLIC FLUX ANALYSIS OF PICHIA PASTORIS STRAINS. PHD THESIS ALBERT FINA ROMERO

Dipòsit Digital de Documents de la UAB
  • Fina Romero, Albert|||0000-0001-7949-0484
  • Ferrer, Pau|||0000-0002-5287-4127
  • Albiol i Sala, Joan|||0000-0001-5626-429X
Supplementary materials to the protocol describing High Throughput Stationary 13C-Metabolic Flux Analysis in Pichia pastoris. This protocol is published in Annex 1 of Albert Fina's PhD thesis. The attached contain relevant information and scripts which are used for: Compression of a Genome Scale Metabolic Model of Pichia pastoris into a core model using Matlab. Translation of the core model into a FTBL format core model, which is the input model for the python-based software influx_si. Modification of the core FTBL model to generate an input model for IsoDesign (a software for the optimization of the C-source for 13C-Metabolic Flux Analysis).