Resultados de investigación

Table S1. Published peer reviewed manuscripts on the effects of waterlogging on wheat.-- Figure S1. Probability of excess of water during summer in Europe., Peer reviewed

[Detailed description] The file ‘dataset_crop_VIs.xlsx’ contains treatment factors, agronomic variables of wheat at flowering and harvest (aboveground biomass dry weight, N concentration, yield and others defined in the key spreadsheet), vegetation indices calculated from the hyperspectral airborne imagery, water deficit index, vegetation indices calculated from Sentinel-2 satellite imagery, solar induce fluorescence and Sentinel-2 bands convolved with the hyperspectral airborne information. The file “airborne_reflectance_1nm.xlsx” contains treatment factors and the average spectra of each plot resampled to 1 nm measured extracted from the airborne hyperspectral imagery acquired in two different dates., [Value of the data] The present dataset could help researchers and farmers to identify suitable genotypes and their responses to nitrogen and water stress. +The original images used are available under request to the authors. More detailed information about the dataset and methodology can be found in the article entitled “Airborne hyperspectral and Sentinel imagery to quantify winter wheat traits through ensemble modeling approaches” published in Precision Agriculture by Pancorbo et al. in 2023., The dataset includes agronomical, spectral and thermal information derived from a field experiment sowed with winter wheat (Triticum aestivum L.) at La Chimenea farm station (40º04’N, 03º32’W, 550 m a.s.l.), near Aranjuez (Madrid, Spain) during two consecutive growing seasons: 2017/2018 and 2018/2019. Each year, it was established 32 plots that were randomly divided into 4 N levels (N0, N1, N2, N3) and two water levels (w1 and W2) with four replications. The N levels ranged from non-fertilized (N0) to over-fertilized (N3). The two water levels were established at the beginning of flowering by irrigating half of the plots (W2). Spectral and thermal measurements were collected from a hyperspectral and a thermal sensors onboard an aircraft. The hyperspectral imager covering the VNIR region (Hyperspec VNIR model, Headwall Photonics, Fitchburg, MA, USA) captured the reflected light between 400 and 850 nm., Ministerio de Economía e Innovación, España. Ref.PID2021-124041OB-C21/22; PRE2018-084215; AGL2017-83283-C2-1-R. Ministerio de Educación, España. Ref. FPU17/01251. Comunidad de Madrid. Ref. AGRISOST-CM S2018/BAA-4330. Structural Funds 2014-2020 (ERDF and ESF)., Peer reviewed

[Introduction] Sunflower breeding for resistance to the parasitic plant sunflower broomrape (Orobanche cumana Wallr.) requires the identification of novel resistance genes. In this research, we conducted a genome-wide association study (GWAS) to identify QTLs associated with broomrape resistance., [Methods] The marker-trait associations were examined across a germplasm set composed of 104 sunflower accessions. They were genotyped with a 600k AXIOM® genome-wide array and evaluated for resistance to three populations of the parasite with varying levels of virulence (races EFR, FGV, and GTK) in two environments., [Results and Discussion] The analysis of the genetic structure of the germplasm set revealed the presence of two main groups. The application of optimized treatments based on the general linear model (GLM) and the mixed linear model (MLM) allowed the detection of 14 SNP markers significantly associated with broomrape resistance. The highest number of marker-trait associations were identified on chromosome 3, clustered in two different genomic regions of this chromosome. Other associations were identified on chromosomes 5, 10, 13, and 16. Candidate genes for the main genomic regions associated with broomrape resistance were studied and discussed. Particularly, two significant SNPs on chromosome 3 associated with races EFR and FGV were found at two tightly linked SWEET sugar transporter genes. The results of this study have confirmed the role of some QTL on resistance to sunflower broomrape and have revealed new ones that may play an important role in the development of durable resistance to this parasitic weed in sunflower., Peer reviewed

[Introduction] Sunflower breeding for resistance to the parasitic plant sunflower broomrape (Orobanche cumana Wallr.) requires the identification of novel resistance genes. In this research, we conducted a genome-wide association study (GWAS) to identify QTLs associated with broomrape resistance., [Methods] The marker-trait associations were examined across a germplasm set composed of 104 sunflower accessions. They were genotyped with a 600k AXIOM® genome-wide array and evaluated for resistance to three populations of the parasite with varying levels of virulence (races EFR, FGV, and GTK) in two environments., [Results and Discussion] The analysis of the genetic structure of the germplasm set revealed the presence of two main groups. The application of optimized treatments based on the general linear model (GLM) and the mixed linear model (MLM) allowed the detection of 14 SNP markers significantly associated with broomrape resistance. The highest number of marker-trait associations were identified on chromosome 3, clustered in two different genomic regions of this chromosome. Other associations were identified on chromosomes 5, 10, 13, and 16. Candidate genes for the main genomic regions associated with broomrape resistance were studied and discussed. Particularly, two significant SNPs on chromosome 3 associated with races EFR and FGV were found at two tightly linked SWEET sugar transporter genes. The results of this study have confirmed the role of some QTL on resistance to sunflower broomrape and have revealed new ones that may play an important role in the development of durable resistance to this parasitic weed in sunflower., Peer reviewed

The PDF file includes: - Figs. S1 to S10 - Tables S1 to S3., Peer reviewed

[Description of methods used for collection/generation of data] The purpose of the sampling was to obtain an index of montane water vole (Arvicola amphibius cantabriae) abundance. For this purpose, 278 fixed sampling points (locationID) were chosen in the study area, resampling them every year in autumn. Since 2025, another sampling has also been winter. The points are located in Meadows and grasslands. The selection was random, using QGIS, with two constraints: they had to be more than 100 m away from each other and that they were less than 500 m from the road. From the year 2023 onwards, 25 other points within forest habitats were selected with the same characteristics. At each points, a 100 m transect was made, parallel to the riverbeds, to maintain constant soil and moisture conditions. Each transect was divided into 20 segments, 5 m long by 5 m wide (2.5 m on each side of the line of advance), and the presence/absence of signs in each segment was noted. In this way, an abundance index was obtained, ranging from 0 (no signs found) to 20 (signs present in all segments). This value correlates with the abundance of the species (Giraudoux et al. 1995). Sampling was repeated annually in late September/early October. Although the target species to be counted was the montane water vole, the presence of Lusitanian pine vole (Microtus lusitanicus), Iberian mole (Talpa occidentalis), cattle and horse was also noted. The molehills of the wild species were differentiated by their characteristics of size, shape, entrance and disposition (Miñarro et al. 2012). For domestic species, the presence/absence of dung in each section was noted., [Methods for processing the data] Until 2021, data were collected on a paper form and then entered into Excel. From 2022 onwards, an Epicollect5 sequence is used., Date updated: 2025-10-29, [EN] This dataset provides the raw results of montane water vole (Arvicola amphibius cantabriae) surveys in 303 fixed points where molehills were counted annually between 2016 and 2025. The points are located in Meadows, grasslands and forests. The main objective of the survey was to obtain a relative abundance index of water vole, but presence of other species (Lusitanian pine vole, Microtus lusitanicus, Spanish mole, Talpa occidentalis, cattle and horse) was also sampled. This dataset will be actualized with new data obtained during the following years., [ES] Este conjunto de datos proporciona los resultados brutos de los censos de rata topera (Arvicola amphibius cantabriae) en 303 puntos fijos donde se contaron toperas anualmente entre 2016 y 2025. Los puntos están ubicados en prados, pastizales y bosques. El principal objetivo del muestreo era obtener un índice de abundancia relativa de la rata topera, pero también se muestreó la presencia de otras especies (topillo lusitano, Microtus lusitanicus, topo ibérico, Talpa occidentalis, vacas y caballos). Este conjunto de datos se actualizará con nuevos datos obtenidos en los próximos años., This study was partially supported by a contract of collaboration between Fundación Reina Sofia and CSIC, M.Torres Diseños Industriales SAU and Jaguar Land Rover España., File List: 1_location_table_TOPERAS.xlsx 2_event_table_TOPERAS.xlsx 3_molehills_count_table_TOPERAS.xlsx 4_cattle_horse_dung_count_table_TOPERAS.xlsx, Peer reviewed

This dataset is composed of 4 files. The main ones are the dataset itself (‘BBMO_database_2009-2022_hy1.csv’ and ‘EOS_database_2010-2019_hy1.csv’) in WHP-Exchange bottle format, with temperature, salinity, dissolved inorganic nutrient concentrations, pH, and total alkalinity data. Information about the time-series name, date, and location (latitude and longitude) is also provided. Information about the equipment used for seawater carbonate system data is also given. The other two files (‘README_BBMO_database_2009-2022.txt’ and ‘README_EOS_database_2010-2019.txt’) include a short description of the database variables, units and more details on the time-series data. The data are provided under an Attribution-ShareAlike 4.0 International license. However, if you use the data, so as to support the authors, please consider citing the above-mentioned article where data collection and analytical techniques are given in detail. Here we only provide an overall description of the content of the data file, The database provides discrete measurements of seawater carbonate system variables (pH and total alkalinity) and ancillary variables (dissolved inorganic nutrients, temperature, salinity, and pressure) in surface seawater collected at two time-series stations, EOS and BBMO, conducted over 2009–2022. The database compiles all the information, measurements, and analysis performed (including date, location, and equipment used). All chemical analyses were assigned a quality indicator. At the two time-series stations, monthly sampling of surface seawater was performed. BBMO temperature and salinity were measured with a SAIV-A/S-SD204 CTD, while at EOS temperature was measured with reversible thermometers and salinity was measured with two CTDs, a SAIV-A/S-SD204 CTD and a CTD75M. For consistency between BBMO and EOS datasets, the salinity record obtained with the SAIV-A/S-SD204 CTD is considered in this study. When salinity values from the SAIV-A/S-SD204 CTD were missing, salinity values from CTD75M were used. The salinity records obtained with the two CTDs were quality controlled and calibrated to obtain a consistent dataset. Discrete seawater samples for pH, TA, and dissolved inorganic nutrients were taken monthly from a depth of 0.5 m both stations (with a Niskin bottle at EOS and in 10 L polyethylene carboys at BBMO). The biogeochemical variables shown in the database are pH reported on the total hydrogen ion scale at 25 °C (PH_TOT), total alkalinity (ALKALI), and dissolved inorganic nutrients (phosphate, PHSPHT, Silicate, SILCAT, and Nitrate, NITRAT). PH_TOT data were obtained by the spectrophotometric method with m-cresol purple using a Cary 100 UV-vis spectrophotometer containing a 25 °C-thermostated cells holder following Clayton and Byrne (1993). Triplicate samples were taken. At EOS, three cylindrical optical glass cells with a 10 cm path-length were filled directly from the Niskin bottle right after reaching land, ready to be analyzed in the next 3–4 hrs. At BBMO, a 150 mL glass bottle was filled leaving no headspace, and three 10 cm path-length cylindrical optical glass cells were filled from it once in the ICM laboratory (< 2h after sampling). For ALKALI measurements, two samples per site were taken in 500 mL borosilicate glass bottles were filled, rinsed three times, and carefully filled from the bottom with a tube. Samples for ALKALI were poisoned with 300 µL mercuric chloride (HgCl2) saturated solution to halt biological activity (Dickson et al., 2007), right after reaching land for EOS samples and at the ICM laboratory for BBMO samples. Bottles were then stored in the dark at room temperature until they were measured in the laboratory, within days up to one month. Each ALKALI sample was measured by duplicate. ALKALI was analyzed by potentiometric titration, determined by double endpoint titration (Mintrop et al., 2000; Pérez and Fraga, 1987), and calibrated with reference materials (Prof. A. Dickson, Scripps Institution of Oceanography (USA); Batches #93, #104, #136, and #179). Samples for dissolved inorganic nutrients were stored frozen at -20 °C in sterile falcon tubes until analysis. These tubes were filled directly from the Niskin bottle upon reaching land in EOS and from a bottle at the ICM laboratory in the case of BBMO samples. Dissolved inorganic nutrients were determined by standard continuous flow analysis with colorimetric detection (Hansen and Grassof, 1983) using a Bran + Luebbe autoanalyser, This research was funded by the European Union – NextGeneration EU – as part of the MITECO program for the Spanish Recovery, Transformation and Resilience Plan (Recovery and Resilience Facility of the European Union established by the Regulation (EU) 2020/2094), entrusted to CSIC, AZTI, SOCIB, and the universities of Vigo and Cadiz. Sampling has been funded by multiple projects of the Spanish Ministry of Science. Financial and institutional support was also received from the Catalan Government (Research Group on Marine Biogeochemistry and Global Change, 2021SGR00430) and from the ‘Severo Ochoa Centre of Excellence’ (CEX2019-000928-S) funded by AEI 10.13039/501100011033, which included a postdoctoral contract to M.I.G.-I, With funding form the Spanish government through the "Severa Ochoa Centre of Excellence" accreditation (CEX2019-000928-S)., Peer reviewed

[EN] The catalogue of documents is compiled in form of a CSV database. It offers information about the original materials' whereabouts, their accessibility online, their senders and receivers (including names and locations), the documents' dates, and it serves to identify the transcriptions that were produced of the documents and also included in this dataset. The transcriptions are provided in two formats: (1) formatted text using Markdown language in order to reproduce the the documents' original layout and (2) plaint text transcriptions., [ES] El catálogo de los documentos se ha compilado en forma de una base de datos CSV. Ofrece información sobre la ubicación donde los materiales originales se archivan, su accesibilidad en línea, sus remitentes y destinatarios (incluidos nombres y ubicaciones), las fechas de los documentos, y sirve para identificar las transcripciones de los documentos que también se incluyen en este conjunto de datos. Las transcripciones se proporcionan en dos formatos: (1) texto formateado utilizando el lenguaje Markdown para reproducir el formato original de los documentos y (2) transcripciones en texto plano., Este conjunto de datos está sujeto a una licencia CC BY 4.0, [EN] This Dataset consists of a catalogue and transcriptions of the correspondence that Ignaz Goldziher (1850-1921) received between 1901 and 1903 in the framework of his collaboration on the book Le livre de Mohammed Ibn Toumert mahdi des almohades, published in 1903 in Algiers and promoted by the French colonial administration. The book contained the first edition of the collected writings attributed to the founder of the Almohad movement, Ibn Tūmart (d. 524/1130). The edition of the Arabic text was prepared by Jean-Dominique Luciani (1851–1932) and Goldziher contributed an introduction of some 100 pages. Goldziher wrote his text in German. Its translation was commissioned to two French orientalists: first to Edmond Doutté (1857-1926), who at some point had to withdraw from the task because of health issues, and then to Maurice Gaudefroy-Demombynes (1862-1957), who prepared the translation that was finally published. In addition, René Basset (1855-1924), professor at the École supérieure des Lettres in Algiers, refers in some of his letters to Goldziher to the work on the book. The letters Goldziher received in the framework of his collaboration are preserved in the Library of the Hungarian Academy of Sciences, and digital reproductions of the documents are available in the library's digital repository., [ES] Este conjunto de datos consiste en un catálogo y transcripciones de la correspondencia que Ignaz Goldziher (1850-1921) recibió entre 1901 y 1903 en el marco de su colaboración en el libro Le livre de Mohammed Ibn Toumert mahdi des almohades, publicado en 1903 en Argel y promovido por la administración colonial francesa. El libro ofrecía la primera edición crítica de los escritos atribuidos al fundador del movimiento almohade, Ibn Tūmart (m. 524/1130). La edición del texto árabe fue preparada por Jean-Dominique Luciani (1851-1932) y Goldziher contribuyó una introducción de unas 100 páginas. Goldziher escribió su texto en alemán. Su traducción se encargó a dos orientalistas franceses: primero a Edmond Doutté (1857-1926), que en algún momento tuvo que desistir de la tarea por problemas de salud, y luego a Maurice Gaudefroy-Demombynes (1862-1957), que preparó la traducción que finalmente se publicó. Además, René Basset (1855-1924), profesor de la École supérieure des Lettres de Argel, se refiere en algunas de sus cartas a Goldziher al trabajo en el libro. Las cartas que Goldziher recibió en el marco de su colaboración se conservan en la Biblioteca de la Academia Húngara de las Ciencias, y reproducciones digitales de los documentos están disponibles en el repositorio digital de la biblioteca., The data was collected under the aegis of the grant PGC2018-099268-A-I00 funded by MCIN/AEI/ 10.13039/501100011033 and by "ERDF A way of making Europe" and the Consejo Superior de Investigaciones Científicas internal grant no. 202210I171., File List: Database-Archival-Sources_v1_1.csv Transcriptions_Markdown/ ../trans03.md ../trans04.md ../trans05.md ../trans06.md ../trans07.md ../trans08.md ../trans09.md ../trans10.md ../trans11.md ../trans12.md ../trans13.md ../trans14.md ../trans15.md ../trans16.md ../trans17.md ../trans18.md ../trans19.md ../trans20.md ../trans21.md ../trans22.md ../trans23.md ../trans24.md ../trans25.md ../trans26.md ../trans27.md ../trans28.md ../trans29.md ../trans30.md ../trans31.md ../trans32.md ../trans33.md ../trans34.md Transcriptions_PlainText/ ../trans03.txt ../trans04.txt ../trans05.txt ../trans06.txt ../trans07.txt ../trans08.txt ../trans09.txt ../trans10.txt ../trans11.txt ../trans12.txt ../trans13.txt ../trans14.txt ../trans15.txt ../trans16.txt ../trans17.txt ../trans18.txt ../trans19.txt ../trans20.txt ../trans21.txt ../trans22.txt ../trans23.txt ../trans24.txt ../trans25.txt ../trans26.txt ../trans27.txt ../trans28.txt ../trans29.txt ../trans30.txt ../trans31.txt ../trans32.txt ../trans33.txt ../trans34.txt, Peer reviewed

[Introduction] The sunflower broomrape (Orobanche cumana Wallr.) gene pools of the Guadalquivir Valley and Cuenca province in Spain had predominantly race-F virulence. A new race G was observed recently in the Guadalquivir Valley potentially due to the genetic recombination of the avirulence genes of both gene pools., [Methods] In this research, we have studied populations with atypical virulence from Cuenca. These populations parasitize on DEB2 sunflower line, resistant to all race-G populations evaluated. Ten populations collected in Cuenca province were evaluated with sunflower differential lines and genotyped with 67 SNP markers., [Results] Although genetic recombination with individuals of the Guadalquivir Valley gene pool has been observed in most populations, recombination of avirulence genes was discarded as the cause of the new virulence because the population with the highest degree of attack on DEB2 showed no introgression from an external gene pool. Accordingly, a point mutation is proposed as the putative cause of the new virulence., [Discussion] The present study provided a detailed characterization of each population, including the accurate classification of the individuals belonging to each of the classical Spanish gene pools, F1 hybrids, and those that evolved from hybridization between both gene pools. This information is essential to understand how sunflower broomrape populations are evolving in Spain, which in turn may be helpful to understand the dynamics of sunflower broomrape populations in other areas of the world and use this information to develop durable strategies for resistance breeding., Peer reviewed

The dataset, including molecular description and Tg. The description of the elbow method. The experimental procedure with which the Tg of 3-lys was measured., Peer reviewed