Resultados totales (Incluyendo duplicados): 45302
Encontrada(s) 4531 página(s)
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
Dataset. 2022

PRINCIPAL COMPONENT ANALYSIS (PCA) OF SAMPLES PROFILED BY SMALL RNASEQ TECHNIQUE

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
A. PCA of urine samples on the basis of normalized read counts of the known and putative novel miRNAs for the 38 samples initially processed. The red arrows indicate the outlier Control samples (C5, C6 and C7). B. PCA excluding the high outlier samples. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
HANDLE: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
PMID: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
Ver en: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
Dataset. 2022

DETAILED CHARACTERISTICS OF THE KNOWN AND PUTATIVE NOVEL MIRNAS IN CAT URINE FOR THE 35 SAMPLES BASED ON RNASEQ DATA

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
A. Proportion of samples for which each of the known miRNAs across the different groups were detected. B. Cumulative abundance of the known feline miRNAs. The dots indicate the log10 of the miRNA abundance for each miRNA. miRNAs are sorted in each group in a decreasing order by their miRNA abundance on the x-axis, independently for each group. C. Proportion of samples for which each of the putative novel miRNA candidates across the different groups were detected. D. Cumulative abundance of the putative novel miRNAs. The dots indicate the log10 of the miRNA abundance for each miRNA. miRNAs are sorted in each group in a decreasing order by their miRNA abundance on the x-axis, independently for each group. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction, CPM: Counts per million., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
HANDLE: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
PMID: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
Ver en: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
Dataset. 2022

PRINCIPAL COMPONENT ANALYSIS (PCA) OF URINE SAMPLES (N = 38) ON THE BASIS OF LOG2 NORMALIZED RELATIVE QUANTITIES (RQ) OF PROFILED MIRNAS USING QPCR

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 figure., All samples together (all groups), as well as each one of the contrasts considered (Controls vs. PN; Control vs. SB/C; Control vs. UO; Control vs. CKD; PN vs. SB/C; PN vs. UO; PN vs. CKD and PN vs. other Pathologies) are shown. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
HANDLE: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
PMID: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
Ver en: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
Dataset. 2022

PEARSON CORRELATION ANALYSIS BETWEEN ABUNDANCE PROFILES OF SMALL RNASEQ AND QPCR DATA FROM SELECTED MIRNAS THAT WERE DA (|LOG2FC| ≥ 1.5 FOR QPCR AND ≥ 2 FOR SMALL RNASEQ; Q-VALUE < 0.05) USING BOTH METHODOLOGIES

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 figure., CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction, CPM: Counts per million, Rq: Relative quantities., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
HANDLE: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
PMID: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
Ver en: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
Dataset. 2022

BLAND-ALTMAN PLOTS OF ABUNDANCE PROFILES OF SMALL RNASEQ AND QPCR

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
The data presented is from selected miRNAs that were DA (|log2FC| ≥ 1.5 for qPCR and |log2FC| ≥ 2 for small RNAseq; q-value < 0.05) using both methodologies. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction, CPM: Counts per million, Rq: Relative quantities., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
HANDLE: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
PMID: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
Ver en: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310630
Dataset. 2022

MIRNAS SELECTED FOR QPCR VERIFICATION

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 table., The table includes for each miRNA the arguments for its selection for further validation, the forward and reverse sequence, the miRBase sequence used as template for primer design, if successful miRNA amplification was obtained with qPCR and qPCR amplification efficiency., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310630
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310630
HANDLE: http://hdl.handle.net/10261/310630
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310630
PMID: http://hdl.handle.net/10261/310630
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310630
Ver en: http://hdl.handle.net/10261/310630
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310630

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310635
Dataset. 2022

CONCENTRATION OF RNA OBTAINED FROM WHOLE URINE

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 table, Total RNA was isolated from whole urine of 38 cats, and 6 μl of each RNA sample was applied in small RNAseq. Concentration and ratios were obtained using Nanodrop measurement., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310635
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310635
HANDLE: http://hdl.handle.net/10261/310635
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310635
PMID: http://hdl.handle.net/10261/310635
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310635
Ver en: http://hdl.handle.net/10261/310635
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310635

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310639
Dataset. 2022

SEQUENCING AND MAPPING STATISTICS

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 table., Reads mapped to the different gene biotypes in the genome are included. SD: standard deviation; rRNA: ribosomal RNA; tRNA: transfer RNA; snoRNA: small nucleolar RNA; snRNA: small nuclear RNA; RE: repeat elements; miRNA: microRNA., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310639
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310639
HANDLE: http://hdl.handle.net/10261/310639
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310639
PMID: http://hdl.handle.net/10261/310639
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310639
Ver en: http://hdl.handle.net/10261/310639
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310639

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310644
Dataset. 2022

MIRDEEP2 RESULTS

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 table., mirDeep2 output of the 996 miRNAs identified with information from their sequences, scores and probabilities of being a true positive miRNA, among others., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310644
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310644
HANDLE: http://hdl.handle.net/10261/310644
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310644
PMID: http://hdl.handle.net/10261/310644
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310644
Ver en: http://hdl.handle.net/10261/310644
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310644

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310683
Dataset. 2022

SUPPORTING INFORMATION FOR METAL-POLYMER HETEROJUNCTION IN COLLOIDAL-PHASE PLASMONIC CATALYSIS

  • Rogolino, Andrea
  • Claes, Nathalie
  • Cizaurre, Judit
  • Marauri, Aimar
  • Jumbo-Nogales, Alba
  • Lawera, Zuzanna
  • Kruse, Joscha
  • Sanromán Iglesias, María
  • Zarketa, Ibai
  • Calvo, Unai
  • Jimenez-Izal, Elisa
  • Rakovich, Yury P.
  • Bals, Sara
  • Matxain, Jon M.
  • Grzelczak, Marek
No

Proyecto: //
DOI: http://hdl.handle.net/10261/310683
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310683
HANDLE: http://hdl.handle.net/10261/310683
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310683
PMID: http://hdl.handle.net/10261/310683
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310683
Ver en: http://hdl.handle.net/10261/310683
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310683

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