BUSCADOR RECOLECTA

CORA.Repositori de Dades de Recerca

doi:10.34810/data699

<p>Dataset of comparative transcriptomics between Adherent Invasive Escherichia coli (AIEC)/non-Adherent Invasive Escherichia coli (non-AIEC) strain pairs.</p> <p>The dataset contains six files: four of them contain the comparisons made between pairs of AIEC and non-AIEC strains. In addition, there are two additional files comparing comparisons made with the same pairs of strains but different conditions.</p> <p>In these files, you can find the gene expression values in each sample analyzed. Moreover, the log2 fold change, p-value, q-value and test_stat are displayed for each comparison. The four comparisons performed are:</p> <p>- Comparison 1 corresponds to comparative transcriptomics between AIEC17 vs ECG28 strains of the supernatant fraction of the infected cell culture.</p> <p>- Comparison 2 corresponds to comparative transcriptomics between AIEC17 vs ECG28 strains of the eukaryotic fraction, containing bacteria adhered and invading intestinal epithelial cells.</p> <p>- Comparison 5 corresponds to comparative transcriptomics between AIEC07 vs ECG04 strains of the supernatant fraction of the infected cell culture.</p> <p>- Comparison 6 corresponds to comparative transcriptomics between AIEC07 vs ECG04 strains of the eukaryotic fraction, containing bacteria adhered and invading intestinal epithelial cells.</p> <p>In each file, statistically significant differences of gene expression are selected and displayed in another sheet.</p>