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Set de datos (Dataset). 2026
Supplementary information Chromosomal Replication, Translocation and Recombination as Putative Events in the Diversification of Vertebrate AQP8-Type Genes [Dataset]
DIGITAL.CSIC. Repositorio Institucional del CSIC
- Finn, Roderick N.
- Cerdà, Joan
R.N.F. was supported by the University of Bergen (Norway). This work was also sup-ported by the Spanish Ministry of Science, Innovation and Universities (MICIU/AEI/10.13039/501100011033), Grant no. PID2022-138066OB-I00 (to J.C.), and the Agency for Management of University and Research Grants (Government of Catalonia), Grant no. 2021 SGR 00068 (to J.C.). The authors also acknowledge the ‘Severo Ochoa Centre of Excellence’ accreditation (CEX2019-000928-S) funded by the Spanish Agencia Estatal de Investigación (AEI) 10.13039/501100011033, Peer reviewed
Set de datos (Dataset). 2026
Supporting information Cell type diversification and phenotype convergence underlying white fin-ornamentation of cyprinid fishes [Dataset]
DIGITAL.CSIC. Repositorio Institucional del CSIC
- Huang, Delai
- Liu, Tiffany
- Carr, August A.
- Mello, Pietro H. de
- Liang, Yipeng
- Shriver, Leah P.
- Chauvigné, François;
- Johnson, Stephen L.
- Cerdà, Joan
- Patti, Gary J.
- Parichy, David M.
Dataset S1. Differential expression analysis from bulk RNA-Seq of XL vs ~X (Fig. 3A).
Dataset S2. Enrichment for signaling and pigment synthesis pathways from bulk RNA-Seq of XL vs. ~X (Fig. 3A).
Dataset S3. Gene enrichment analyses (GO terms, KEGG pathways; Fig. 3A).
Dataset S4. Pteridine pathway summary; pteridine synonyms and properties (Fig. 4A) (refs. 6, 13, 22, 41-57).
Dataset S5. LC-MS compound discovery (rgmb, rgmb/+; ltk-/- zebrafish; Fig. 4B, SI Appendix, Fig. S8C).
Dataset S6. Multivariate analysis of LC-MS compound discovery data, one-tailed tests (rgmb, rgmb/+; ltk-/- zebrafish; Fig. 4B).
Dataset S7. Multivariate analysis of LC-MS compound discovery data, two-tailed tests (rgmb, rgmb/+; ltk-/- zebrafish; SI Appendix, Fig. S8C).
Dataset S8. LC-MS standards-verified pteridines (rgmb, rgmb/+; ltk-/- zebrafish; Fig. 4C).
Dataset S9. LC-MS compound discovery for wild-type zebrafish juvenile (14 SSL; SI Appendix, Fig. S8D).
Dataset S10. Cell-type contrasts for LC-MS compound discovery data from wild-type zebrafish juvenile (14 SSL; SI Appendix, Fig. S8D).
Dataset S11. LC-MS compound discovery for spra-/- mosaic vs. wild-type zebrafish (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S12. Analysis of LC-MS compound discovery data for spra-/- mosaic zebrafish vs. wild type (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S13. LC-MS compound discovery for spra-/- mosaic Tanichthys vs. wild-type (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S14. Analysis of LC-MS compound discovery data for spra-/- mosaic zebrafish vs. wild type (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S15. LC-MS guanine and urate in Tanichthys fin samples (SI Appendix, Fig. 8E), This work was supported by NIH R35 GM122471 (to D.M.P.), with support for Aqp3 channel analyses from Spanish Ministry of Science, Innovation and Universities (MICIU/AEI/10.13039/501100011033) and the European Regional Development Fund (European Union) Grant No. PID2022-138066OB-I00 to J.C, This work contributes to the Institut de Ciències del Mar "Severo Ochoa Centre of Excellence" accreditation CEX2024-001494-S funded by AEI 10.13039/501100011033 of the Spanish Ministry of Science and Innovation, Peer reviewed
Dataset S2. Enrichment for signaling and pigment synthesis pathways from bulk RNA-Seq of XL vs. ~X (Fig. 3A).
Dataset S3. Gene enrichment analyses (GO terms, KEGG pathways; Fig. 3A).
Dataset S4. Pteridine pathway summary; pteridine synonyms and properties (Fig. 4A) (refs. 6, 13, 22, 41-57).
Dataset S5. LC-MS compound discovery (rgmb, rgmb/+; ltk-/- zebrafish; Fig. 4B, SI Appendix, Fig. S8C).
Dataset S6. Multivariate analysis of LC-MS compound discovery data, one-tailed tests (rgmb, rgmb/+; ltk-/- zebrafish; Fig. 4B).
Dataset S7. Multivariate analysis of LC-MS compound discovery data, two-tailed tests (rgmb, rgmb/+; ltk-/- zebrafish; SI Appendix, Fig. S8C).
Dataset S8. LC-MS standards-verified pteridines (rgmb, rgmb/+; ltk-/- zebrafish; Fig. 4C).
Dataset S9. LC-MS compound discovery for wild-type zebrafish juvenile (14 SSL; SI Appendix, Fig. S8D).
Dataset S10. Cell-type contrasts for LC-MS compound discovery data from wild-type zebrafish juvenile (14 SSL; SI Appendix, Fig. S8D).
Dataset S11. LC-MS compound discovery for spra-/- mosaic vs. wild-type zebrafish (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S12. Analysis of LC-MS compound discovery data for spra-/- mosaic zebrafish vs. wild type (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S13. LC-MS compound discovery for spra-/- mosaic Tanichthys vs. wild-type (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S14. Analysis of LC-MS compound discovery data for spra-/- mosaic zebrafish vs. wild type (Fig. 4D, SI Appendix, Fig. 8F).
Dataset S15. LC-MS guanine and urate in Tanichthys fin samples (SI Appendix, Fig. 8E), This work was supported by NIH R35 GM122471 (to D.M.P.), with support for Aqp3 channel analyses from Spanish Ministry of Science, Innovation and Universities (MICIU/AEI/10.13039/501100011033) and the European Regional Development Fund (European Union) Grant No. PID2022-138066OB-I00 to J.C, This work contributes to the Institut de Ciències del Mar "Severo Ochoa Centre of Excellence" accreditation CEX2024-001494-S funded by AEI 10.13039/501100011033 of the Spanish Ministry of Science and Innovation, Peer reviewed
Proyecto: /MICIU/PID2022-138066OB-I00