BUSCADOR RECOLECTA

Genes and pathways affected by expression and copy number changes in tumors across projects and cancer types.

Bioinformatics method to identify individual driver mutations.

This database contains the results of the driver analysis performed by the Cancer Genome Interpreter across 6,792 exomes of a pan-cancer cohort of 28 tumor types. Validated oncogenic mutations are identified according to the state-of-the-art clinical and experimental data, whereas the effect of the mutations of unknown significance is predicted by the OncodriveMUT method.

Mutations, genes and pathways involved in tumorigenesis across 4,623 cancer genomes/exomes from 13 cancer sites. IntOGen-mutations identifies cancer drivers across tumor types. Nature Methods 10, 2013, doi:10.1038/nmeth.2642

CGI drug prescription assigns targeted drugs to a tumor, based on its genomic alterations, according different levels of evidence (from pre-clinical assays to clinical guidelines).

This dataset compiles information obtained during the cruise RETRO-BMC. A companion dataset includes additional information obtained using high-frequency profiling floats and a high-resolution microstructure profiler. The "readme file" contains a description of the different folders and archives, The RETRO-BMC oceanographic cruise was designed to characterize the spatial structures and variability of the Brazil-Malvinas Confluence (BMC) region. The cruise was carried in April 2017 on board the R/V Hespérides, departing from Ushuaia (Argentina) and arriving to Santos (Brazil). There were a total of 33 hydrographic stations, carried out between 13 and 25 April 2017. All stations were offshore from the continental platform and within 42ºS-36ºS and 58ºW-52ºW. Conductivity-temperature-depth (CTD) data were obtained with a SeaBird 911 Plus multi-parametric probe, with redundant salinity and temperature sensors, and additional dissolved oxygen (SBE-43) and fluorescence and turbidity (Wetlabs AFL-NTU-RTD) sensors. Water velocity data was obtained at the stations with a lowered acoustic Doppler current profiler (LADCP) and along the ship’s track with the vessel-mounted ADCP (VADCP). During the entire ship’s track inside the study region, the VADCP gathered velocity data in low-range mode (one velocity profile every 2 min between about 20 and 800 m at 8-m depth bins) and a thermosalinograph gathered salinity and temperature data (every 5 s at a depth of 5 m). The LADCP was attached, together with the CTD, to a 12-liters 24-Niskin-bottle rosette that was used to gather water samples at discrete depths, which were frozen and later analyzed to determine the concentration of inorganic nutrients. In addition, two high-resolution three-dimensional surveys were carried out at the Confluence front with a SeaSoar covering the area between 40.6-39.0°S and 55.6°W-53.8°W. The first transect was completed between the 16 and 17 April, 46 hours covering 620 km, while the second sampled 751 km between the 19 and 21 April 2017, during 52 hours. The SeaSoar was equipped with a SeaBird 911 CTD with the same sensors as in the hydrographic stations, and recorded data in a sawtooth pattern between 5 and 360 m, with a horizontal spacing between apogees of 4 km. Finally, five subsurface drifters, dragged at 100 m, were launched early in the cruise. The cruise was supported by the Spanish Ministerio de Economía y Competitividad through project “Retroflexiones de frontera oeste: conexiones en transportes latitudinales y recirculation de giro en el Océano Atlántico” (VA‐DE‐RETRO, reference number CTM2014‐56987‐P), The cruise was supported by the Spanish Ministerio de Economía y Competitividad through project “Retroflexiones de frontera oeste: conexiones en transportes latitudinales y recirculation de giro en el Océano Atlántico” (VA‐DE‐RETRO, reference number CTM2014‐56987‐P), Peer reviewed

Sea temperature vs depth measured by the Pati Cientific at Somorrostro, Barcelona, on 2022-04-27., BIT Habitat, Barcelona Science Plan 2019, MONOCLE and EMSO - Laboratorios Submarinos Profundo, Peer reviewed

Sea temperature vs depth measured by the Pati Cientific at Somorrostro, Barcelona, on 2022-03-10., BIT Habitat, Barcelona Science Plan 2019, MONOCLE and EMSO - Laboratorios Submarinos Profundo, Peer reviewed

Sea temperature vs depth measured by the Pati Cientific at Somorrostro, Barcelona, on 2022-05-23., BIT Habitat, Barcelona Science Plan 2019, MONOCLE and EMSO - Laboratorios Submarinos Profundo, Peer reviewed

Sea temperature vs depth measured by the Pati Cientific at Somorrostro, Barcelona, on 2022-04-19., Peer reviewed