Resultados totales (Incluyendo duplicados): 44
Encontrada(s) 5 página(s)
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285769
Dataset. 2019

METEOROLOGICAL & OCEANOGRAPHIC DATA FROM NW GALICIAN COAST

  • Álvarez-Salgado, Xosé Antón
  • Fuentes-Santos, I.
  • Otero, Jaime
File containing time series of daily values of coastal winds, upwelling index (offshore Ekman transport), continental runoff, solar irradiance and sea surface temperature for selected sites in the NW Galician coast (NW Spain). These data can be freely downloaded from the web sites of the Galician Meteorological Agency MeteoGalicia (http://www.meteogalicia.es), the Instituto Español de Oceanografía (http://www.indicedeafloramiento.ieo.es) and ICOADS (http://icoads.noaa.gov). We just put them together in a single file. The file includes metadata indicating units, the position of the selected stations and the origin of the data, European Commission: ClimeFish - Co-creating a decision support framework to ensure sustainable fish production in Europe under climate change (677039), Peer reviewed

Proyecto: EC/H2020/677039
DOI: http://hdl.handle.net/10261/285769
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285769
HANDLE: http://hdl.handle.net/10261/285769
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285769
PMID: http://hdl.handle.net/10261/285769
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285769
Ver en: http://hdl.handle.net/10261/285769
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285769

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285810
Dataset. 2019

FLESH YIELD OF COMMERCIAL MUSSELS CULTURED IN THE RIA DE ARES BETANZOS

  • Álvarez-Salgado, Xosé Antón
  • Latorre, G.
  • Fernández-Reiriz, María José
  • Labarta, Uxío
Flesh yield of commercial mussels cultured in the Ría de Ares-Betanzos (A Coruña, NW Spain). The flesh yield is calculated as the percentage of the total weight of 1 kg of live mussels > 50 mm collected in a mussel raft that is meat weight after opening the valves with water vapour. Flesh yield data have been aggregated monthly and the seasonal cycle of each year has been adjusted to the following harmonic function: FY (%) = A1 + A2* cosine (2*Pi*t/12 + A3) where A1 is the seasonal average value of FY, A2 is half the amplitude of the seasonal cycle of FY; and A3 is the month of the year when FY is halfway between the seasonal minimum and the seasonal maximum. The values of A1, A2 and A3 for years 2002 to 2012 are reported for the two mussel cultivation areas of the Ría de Ares-Betanzos (Arnela and Lorbé) These data have been published in X.A. Álvarez-Salgado, U. Labarta, V. Vinseiro and M.J. Fernández Reiriz (2017). Environmental drivers of mussels flesh yield in a coastal upwelling system. Ecological Indicators 79, 323-329., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/285810
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285810
HANDLE: http://hdl.handle.net/10261/285810
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285810
PMID: http://hdl.handle.net/10261/285810
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285810
Ver en: http://hdl.handle.net/10261/285810
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285810

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285813
Dataset. 2019

CLOSURE OF MUSSEL CULTIVATION AREAS IN THE RÍA DE ARES BETANZOS

  • Álvarez-Salgado, Xosé Antón
  • Latorre, G.
  • Fernández-Reiriz, María José
  • Labarta, Uxío
Number of days per month that the mussel cultivation areas of the Ría de Areas-Betanzos (A Coruña, NW Spain), Arnela and Lorbé, have been closed to mussel extraction. The toxicity causing the closures (ASP, DSP and PSP) is also indicated. Data covers the period from 2000 to 2007. The Technological Institute for the Monitoring of the Marine Environment in Galicia (INTECMAR) announces the closures and their causes (ASP, DSP, PSP) on a daily basis through the web page http://www.intecmar.org. However, previous daily reports are not freely available in the web page. This data has been published in X.A. Alvarez-Salgado, F.G. Figueiras, M.J. Fernandez-Reiriz, U. Labarta, L. Peteiro and S. Piedracoba (2011). Control of lipophilic shellfish poisoning outbreaks by seasonal upwelling and continental runoff. Harmful Algae 10, 121-129., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/285813
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285813
HANDLE: http://hdl.handle.net/10261/285813
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285813
PMID: http://hdl.handle.net/10261/285813
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285813
Ver en: http://hdl.handle.net/10261/285813
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/285813

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/308427
Dataset. 2022

FLOWCHART OUTLINING THE PIPELINE FOR SMALL RNASEQ ANALYSIS

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 figure, Including the identification of known and putative novel miRNAs, miRNA abundance profiling and differential abundance analysis. rRNA: ribosomal RNA; tRNA: transfer RNA; snoRNA: small nucleolar RNA; snRNA: small nuclear RNA; RE: repeat elements; qPCR: quantitative real-time PCR., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/308427
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/308427
HANDLE: http://hdl.handle.net/10261/308427
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/308427
PMID: http://hdl.handle.net/10261/308427
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/308427
Ver en: http://hdl.handle.net/10261/308427
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/308427

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310598
Dataset. 2022

STACKED BAR PLOT REPORTING THE FRACTION OF SMALL RNASEQ READS ASSIGNED TO THE ANNOTATED FELIS CATUS MIRNAS (FCA-MIRNAS) FROM ENSEMBL V.99 (BLUE), FELINE GENOME (ORANGE) OR THAT WERE NOT MAPPED (RED)

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 figure, CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction, Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310598
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310598
HANDLE: http://hdl.handle.net/10261/310598
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310598
PMID: http://hdl.handle.net/10261/310598
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310598
Ver en: http://hdl.handle.net/10261/310598
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310598

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
Dataset. 2022

PRINCIPAL COMPONENT ANALYSIS (PCA) OF SAMPLES PROFILED BY SMALL RNASEQ TECHNIQUE

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
A. PCA of urine samples on the basis of normalized read counts of the known and putative novel miRNAs for the 38 samples initially processed. The red arrows indicate the outlier Control samples (C5, C6 and C7). B. PCA excluding the high outlier samples. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
HANDLE: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
PMID: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603
Ver en: http://hdl.handle.net/10261/310603
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310603

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
Dataset. 2022

DETAILED CHARACTERISTICS OF THE KNOWN AND PUTATIVE NOVEL MIRNAS IN CAT URINE FOR THE 35 SAMPLES BASED ON RNASEQ DATA

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
A. Proportion of samples for which each of the known miRNAs across the different groups were detected. B. Cumulative abundance of the known feline miRNAs. The dots indicate the log10 of the miRNA abundance for each miRNA. miRNAs are sorted in each group in a decreasing order by their miRNA abundance on the x-axis, independently for each group. C. Proportion of samples for which each of the putative novel miRNA candidates across the different groups were detected. D. Cumulative abundance of the putative novel miRNAs. The dots indicate the log10 of the miRNA abundance for each miRNA. miRNAs are sorted in each group in a decreasing order by their miRNA abundance on the x-axis, independently for each group. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction, CPM: Counts per million., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
HANDLE: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
PMID: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606
Ver en: http://hdl.handle.net/10261/310606
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310606

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
Dataset. 2022

PRINCIPAL COMPONENT ANALYSIS (PCA) OF URINE SAMPLES (N = 38) ON THE BASIS OF LOG2 NORMALIZED RELATIVE QUANTITIES (RQ) OF PROFILED MIRNAS USING QPCR

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 figure., All samples together (all groups), as well as each one of the contrasts considered (Controls vs. PN; Control vs. SB/C; Control vs. UO; Control vs. CKD; PN vs. SB/C; PN vs. UO; PN vs. CKD and PN vs. other Pathologies) are shown. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
HANDLE: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
PMID: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610
Ver en: http://hdl.handle.net/10261/310610
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310610

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
Dataset. 2022

PEARSON CORRELATION ANALYSIS BETWEEN ABUNDANCE PROFILES OF SMALL RNASEQ AND QPCR DATA FROM SELECTED MIRNAS THAT WERE DA (|LOG2FC| ≥ 1.5 FOR QPCR AND ≥ 2 FOR SMALL RNASEQ; Q-VALUE < 0.05) USING BOTH METHODOLOGIES

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
1 figure., CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction, CPM: Counts per million, Rq: Relative quantities., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
HANDLE: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
PMID: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617
Ver en: http://hdl.handle.net/10261/310617
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310617

Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
Dataset. 2022

BLAND-ALTMAN PLOTS OF ABUNDANCE PROFILES OF SMALL RNASEQ AND QPCR

  • Gòdia, Marta
  • Brogaard, Louise
  • Mármol-Sánchez, Emilio
  • Langhorn, Rebecca
  • Nordang Kieler, Ida
  • Reezigt, Bert Jan
  • Nielsen, Lise Nikolic
  • Jessen, Lisbeth Rem
  • Cirera, Susanna
The data presented is from selected miRNAs that were DA (|log2FC| ≥ 1.5 for qPCR and |log2FC| ≥ 2 for small RNAseq; q-value < 0.05) using both methodologies. CKD: Chronic kidney disease; PN: Pyelonephritis; SB/C: Subclinical bacteriuria/Cystitis; UO: Ureteral obstruction, CPM: Counts per million, Rq: Relative quantities., Peer reviewed

Proyecto: //
DOI: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
HANDLE: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
PMID: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621
Ver en: http://hdl.handle.net/10261/310621
Digital.CSIC. Repositorio Institucional del CSIC
oai:digital.csic.es:10261/310621

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