BUSCADOR RECOLECTA

Annex: Summary statistics on occurrence and consumption data and exposure assessment results Table 1 Number of analytical results excluded from the initial dataset during data cleaning, and justification for exclusion Table 2 Occurrence values of OTA (µg/kg) in food as reported in the cleaned database Table 3 Occurrence values of OTA (µg/kg) in food as used for the exposure assessment Table 4 Dietary surveys per country and age group available in the EFSA Comprehensive Database, considered in the exposure assessment Table 5 Results of chronic dietary exposure assessment on OTA (ng/kg bw per day) Table 6 Main contributing food categories to the mean LB exposure assessments to OTA across European dietary surveys and population groups Table 7 Distribution of LOQ values among the different food categories Table 8 All contributing food categories to the mean LB and UB exposure to OTA across European dietary surveys and population groups FormattedDATA_OchratoxinA.zip: Occurrence data on OTA Contains the occurrence data of OTA on 73,891 food samples presented in the opinion as described in its section 4.7 Occurrence data., Peer reviewed

Annex_III_occurrence data.xlsx This Annex is an excel file presenting tables on occurrence data on nitrate and nitrite in feed. Nitrate Nitrite_OCC_ZENODO.CSV Contains the raw (no data cleaning applied to it) occurrence dataset on nitrate and nitrite as extracted from EFSA DWH on 03 December 2019 in feed samples presented in the opinion as described in its section 3.2.2. The data is provided in csv format. This dataset is compliant with EFSA SSD model and contains two additional columns documenting issues identified in the cleaning process (column: issue) and the action taken (column: action) to address the issue (e.g. delete record or update values in specific fields)., Peer reviewed

The annexes A to E to the Scientific Opinion on Aflatoxins in Food included in the upload are excel files as follows: Annex A: Dietary surveys per country and age group available in the EFSA Comprehensive Database, considered in the exposure assessment Annex B: Occurrence data on aflatoxins Annex C: Proportion of left-censored data and the mean concentrations of the quantified analytical results of AFB1 for pistachios, hazelnuts, peanuts, other nuts and dried figs Annex D: AFB1 and AFM1 concentrations reported for organic farming and conventional farming in selected food categories Annex E: Mean and high chronic dietary exposure to aflatoxins per survey and the contribution of different food groups to the dietary exposure, Peer reviewed

This Annex is an excel file which presents tables on chlorinated paraffins on occurrence data in food and dietary exposure assessment for humans., Peer reviewed

Annexes to the Risk to human health related to the presence of perfluoroalkyl substances in food - available at: https://www.efsa.europa.eu/en/efsajournal/pub/6223 Annex A - Occurrence and exposure data Annex B - Distribution of analytical results Annex C - Comparison of PFOA and PFOS occurrence and exposure data with previous assessment (EFSA CONTAM Panel, 2018). Also the raw (no data cleaning applied to it) occurrence dataset as extracted from EFSA DWH is provided in csv format. This dataset is compliant with EFSA SSD model and contains two additional columns documenting issues identified in the cleaning process (column: issue) and the action taken (column: action) to address the issue (e.g. delete record or update values in specific fields)., Peer reviewed

This package contains the datasets and supplementary materials used in the IPIN 2020 Competition. Contents: IPIN2020_Track03_TechnicalAnnex_V1-01.pdf: Technical annex describing the competition 01-Logfiles: This folder contains a subfolder with the 78 training logfiles, 72 of them single floor, 4 in bookshelves areas and 2 of them in floor-transition zones, a subfolder with the 13 validation logfiles, and a subfolder with the 1 blind evaluation logfile as provided to competitors. 02-Supplementary_Materials: This folder contains the matlab/octave parser, the raster maps, the files for the matlab tools and the trajectory visualization. 03-Evaluation: This folder contains the scripts used to calculate the competition metric, the 75th percentile on the 82 evaluation points. It requires the Matlab Mapping Toolbox. The ground truth is also provided as a CSV file. Since the results must be provided with a 2Hz freq. starting from apptimestamp 0, the GT includes the closest timestamp matching the timing provided by competitors. It contains a sample of reported estimations and the corresponding results. Additionally, we provide a second script to provide a more detailed report on the results file (requires export_fig folder to run)., Parts of this work were carried out with the financial support received from projects and grants: - A-WEAR (H2020-MSCA-ITN-2018, Grant Agreement 813278) - INSIGNIA (PTQ2018-009981) - REPNIN+ network (TEC2017-90808-REDT) - LORIS (TIN2012-38080-C04-04) - SmartLoc(CSIC-PIE Ref.201450E011) - TARSIUS (TIN2015-71564-C4-2-R, MINECO/FEDER) - MICROCEBUS (MICINN, ref. RTI2018-095168-B-C55, MCIU/AEI/FEDER UE) ., Peer reviewed

[Methods] This dataset is for 50 Bale long-eared bats, Plecotus balensis, captured in five moutnain ranges in Ethiopia 2014-2015 and genotyped for 19 polymorphic autosomal microsatellite loci previously developed for the genus (Razgour et al., 2013, Ecology Letters, https://doi.org/10.1111/ele.12158) and two mitochondrial DNA regions: 650 bp fragment of the gene cytochrome b (cytb) and 460 bp fragment of the hyper-variable region (HV1) of the control region. The microsatellite dataset is presented as genepop file. Sequence assembly of the concatenated cytochrome b and hyper-variable I region of the mitochondrial DNA is presented as .fasta file. The dataset also includes output of the Maxent species distribution models and STRUCTURE (Bayesian individual-based assignment tests) outputs., Whilst climate change is recognised as a major future threat to biodiversity, most species are currently threatened by extensive human-induced habitat loss, fragmentation and degradation. Tropical high altitude alpine and montane forest ecosystems and their biodiversity are particularly sensitive to temperature increases under climate change, but they are also subject to accelerated pressures from land conversion and degradation due to a growing human population. We studied the combined effects of anthropogenic land-use change, past and future climate changes and mountain range isolation on the endemic Ethiopian Highlands long-eared bat, Plecotus balensis, an understudied bat that is restricted to the remnant natural high altitude Afroalpine and Afromontane habitats. We integrated ecological niche modelling, landscape genetics and model-based inference to assess the genetic, geographic and demographic impacts of past and recent environmental changes. We show that mountain range isolation and historic climates shaped population structure and patterns of genetic variation, but recent anthropogenic land-use change and habitat degradation are associated with a severe population decline and loss of genetic diversity. Models predict that the suitable niche of this bat has been progressively shrinking since the last glaciation period. This study highlights threats to Afroalpine and Afromontane biodiversity, squeezed to higher altitudes under climate change while losing genetic diversity and suffering population declines due to anthropogenic land-use change. We conclude that the conservation of tropical montane biodiversity requires a holistic approach, using genetic, ecological and geographic information to understand the effects of environmental changes across temporal scales and simultaneously addressing the impacts of multiple threats., British Ecological Society, Award: 4849/5889. EBD-CSIC, Award: MicroP_SO_14 and MicroProy_SO_15. Natural Environment Research Council, Award: UK NE/M018660/1. University of Stirling, Award: Impact Fellowship. EBD-CSIC, Award: MicroP_SO_14 and MicroProy_SO_15., Peer reviewed

Longidorid nematodes comprise more than 500 species, and Longidorus and Xiphinema are the most diversified, abundant and cosmopolitan genera, which increases the risk of species misidentification. We conducted an integrative morphometric and genetic study on two longidorid species to elucidate the existence of new cases of cryptic speciation within the genera Longidorus and Xiphinema. Detailed morphological, morphometric, multivariate and genetic studies were carried out, as well as mitochondrial and nuclear haploweb analyses, to differentiate species within the L. iliturgiensis- and X. hispanum-complexes. Species delimitation using haplonet tools of L. iliturgiensis-species complex clearly separated L. tabernensis sp. nov. from L. iliturgiensis and L. indalus. Similarly, the haploweb analysis of X. subbaetense sp. nov. showed it as a unique and separate species from X. hispanum and X. adenohystherum. D2-D3 expansion domains of 28S rRNA, partial 18S rRNA, and partial coxI region were used for inferring phylogenetic relationships. The present study provides new insights into the diversity of Longidorus and Xiphinema species detected in southern Spain, and new evidence of cryptic speciation in both genera. These results support our hypothesis that the biodiversity of Longidoridae in southern Europe is higher than previously supposed and is still not fully clarified., Peer reviewed

Dataset 1 includes weekly estimations of median, maximum, minimum and range values of temperature and humidity in nest boxes, for three locations, two experimental treatments and in relation to dormice presence in February., Dataset 2 includes daily differences (between 9:00 am and 3:00 am) in temperature and humidity of open nest boxes occupied or not by dormice., Dataset 3 describes Carnus emergence patterns from each sample of nest material, including number of emerged flies (Carnus abundance), date of first emergence and emergence duration., Dataset 4 includes intensity of parasitism suffered by hoopoe nestlings during the breeding season after the experiment, showing number of Carnus, hatching date, brood size and nestling age., The dataset contains data collected in Guadix, Granada (southeast Spain) in 2020, in the framework of a research to evaluate the effects of overwinter occupancy of nest cavities on the incidence of ectoparasitism suffered by hoopoes (Upupa epops) in the next breeding season., The research group benefited from grants CGL2017-83103-P, CGL2017-89063-P, PGC2018-097426-B-C22, and PID2020-117429GB-C21 funded by MCIN/AEI/ 10.13039/501100011033 and by “ERDF A way of making Europe”. AJGN was funded by the Spanish Ministerio de Ciencia, Innovación y Universidades (Programa de Formación de Personal Investigador JAE Intro). GT was supported by the Ramón y Cajal Programme (RYC-2013-13040)., Peer reviewed

Peer reviewed